RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PCBP3P57721 371 aaKnown RBP15.85■□□□□ 0.13
CPSF4-209ENST00000465132 GPR85P60893 370 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 HYAL4Q2M3T9 481 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 MTX3Q5HYI7 312 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 TMEM211Q6ICI0 200 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 ZNF550Q7Z398 422 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 MARCH3Q86UD3 253 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 B4GALNT2Q8NHY0 566 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 FBXO27Q8NI29 283 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 FAM162AQ96A26 154 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 THTPAQ9BU02 230 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 PINK1Q9BXM7 581 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 LRMDAQ9H2I8 198 aa15.85■□□□□ 0.13
CPSF4-209ENST00000465132 EXOSC3Q9NQT5 275 aaKnown RBP15.85■□□□□ 0.13
CPSF4-209ENST00000465132 C2CD3Q4AC94 2353 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 A0A087WZY1 265 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 IGLV3-32A0A0A0MS00 114 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 M0QX08 132 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 HCRTR2O43614 444 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 HOXB6P17509 224 aaKnown RBP15.84■□□□□ 0.13
CPSF4-209ENST00000465132 IGFBP2P18065 325 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 PGM1P36871 562 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 DNASE1L1P49184 302 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 P2RX1P51575 399 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 ZNF41P51814 821 aaPredicted RBP15.84■□□□□ 0.13
CPSF4-209ENST00000465132 CBFBQ13951 182 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 ARHGAP11AQ6P4F7 1023 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 DHRS4L2Q6PKH6 230 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 SPNS3Q6ZMD2 512 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 ZAR1Q86SH2 424 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 GRAMD2AQ8IUY3 354 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 C10orf111Q8N326 155 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 LILRB4Q8NHJ6 448 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 DUSP19Q8WTR2 217 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 ASB5Q8WWX0 329 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 FIG4Q92562 907 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 PROX1Q92786 737 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 SLC7A6OSQ96CW6 309 aaPredicted RBP15.84■□□□□ 0.13
CPSF4-209ENST00000465132 LAT2Q9GZY6 243 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 TP63Q9H3D4 680 aaPredicted RBP15.84■□□□□ 0.13
CPSF4-209ENST00000465132 GORASP2Q9H8Y8 452 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 STOML1Q9UBI4 398 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 CD300AQ9UGN4 299 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 SAMD4AQ9UPU9 718 aaKnown RBP15.84■□□□□ 0.13
CPSF4-209ENST00000465132 ZNF443Q9Y2A4 671 aaPredicted RBP15.84■□□□□ 0.13
CPSF4-209ENST00000465132 MRPS18CQ9Y3D5 142 aaKnown RBP15.84■□□□□ 0.13
CPSF4-209ENST00000465132 SNX13Q9Y5W8 968 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 HIVEP1P15822 2718 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 TACC2O95359 2948 aa15.84■□□□□ 0.13
CPSF4-209ENST00000465132 NINQ8N4C6 2090 aa15.83■□□□□ 0.13
CPSF4-209ENST00000465132 SYT5O00445 386 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 GGT1P19440 569 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 PGCP20142 388 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 AQP1P29972 269 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 CHRNB4P30926 498 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 GAS1P54826 345 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 DSCR4P56555 118 aaPredicted RBP15.83■□□□□ 0.12
CPSF4-209ENST00000465132 COPZ1P61923 177 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 TRAP1Q12931 704 aaKnown RBP15.83■□□□□ 0.12
CPSF4-209ENST00000465132 TRIM25Q14258 630 aaKnown RBP15.83■□□□□ 0.12
CPSF4-209ENST00000465132 MAPK11Q15759 364 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 RPS26P11Q5JNZ5 115 aaPredicted RBP15.83■□□□□ 0.12
CPSF4-209ENST00000465132 GLYATQ6IB77 296 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 FAM109AQ8N4B1 249 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 TMCO5AQ8N6Q1 288 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 TMEM234Q8WY98 164 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 ASB9Q96DX5 294 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 LRGUKQ96M69 825 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 GALNT9Q9HCQ5 603 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 NPDC1Q9NQX5 325 aaPredicted RBP15.83■□□□□ 0.12
CPSF4-209ENST00000465132 DEPPQ9NTK1 212 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 TUBA8Q9NY65 449 aaPredicted RBP15.83■□□□□ 0.12
CPSF4-209ENST00000465132 RNF6Q9Y252 685 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 SLC9A8Q9Y2E8 581 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 C15orf41Q9Y2V0 281 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 EML6Q6ZMW3 1958 aa15.83■□□□□ 0.12
CPSF4-209ENST00000465132 NPIPA5A0A0B4J1W7 369 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 CDHR4A6H8M9 788 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 NPIPA7E9PJI5 369 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 LINC01387J3KSC0 135 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 GSC2O15499 205 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 MFN2O95140 757 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 NUDT14O95848 222 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 NPIPA8P0DM63 369 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 TCN1P20061 433 aaPredicted RBP15.82■□□□□ 0.12
CPSF4-209ENST00000465132 IFNA8P32881 189 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 PTGDSP41222 190 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 EIF1P41567 113 aaKnown RBP15.82■□□□□ 0.12
CPSF4-209ENST00000465132 NCALDP61601 193 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 PPIAP62937 165 aaKnown RBP15.82■□□□□ 0.12
CPSF4-209ENST00000465132 TFF3Q07654 80 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 FXNQ16595 210 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 GLYR1Q49A26 553 aaPredicted RBP15.82■□□□□ 0.12
CPSF4-209ENST00000465132 LRRC23Q53EV4 343 aaPredicted RBP15.82■□□□□ 0.12
CPSF4-209ENST00000465132 EMC4Q5J8M3 183 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 BICRALQ6AI39 1079 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 RPRMLQ8N4K4 120 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 RNF148Q8N7C7 305 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 OR52E4Q8NGH9 312 aa15.82■□□□□ 0.12
CPSF4-209ENST00000465132 OR5W2Q8NH69 310 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms