RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 SRXN1Q9BYN0 137 aa23.12■■□□□ 1.29
U2AF1-206ENST00000464750 TIGARQ9NQ88 270 aa23.12■■□□□ 1.29
U2AF1-206ENST00000464750 THAP1Q9NVV9 213 aa23.12■■□□□ 1.29
U2AF1-206ENST00000464750 MARCOQ9UEW3 520 aaPredicted RBP23.12■■□□□ 1.29
U2AF1-206ENST00000464750 DEFB108AA8MXU0 73 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 KIAA0513O60268 411 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 SNNO75324 88 aaPredicted RBP23.11■■□□□ 1.29
U2AF1-206ENST00000464750 UGT2B17O75795 530 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 CYP7B1O75881 506 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 NTN1O95631 604 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 CRYGSP22914 178 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 AGTR1P30556 359 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 CHI3L1P36222 383 aaPredicted RBP23.11■■□□□ 1.29
U2AF1-206ENST00000464750 KHKP50053 298 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 UFM1P61960 85 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 SELENBP1Q13228 472 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 SKP2Q13309 424 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 DEFB113Q30KQ7 82 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 TMEM176BQ3YBM2 270 aaPredicted RBP23.11■■□□□ 1.29
U2AF1-206ENST00000464750 TGIF2LYQ8IUE0 185 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 RNF128Q8TEB7 428 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 ZFP90Q8TF47 636 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 ABHD3Q8WU67 409 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 XAGE5Q8WWM1 108 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 RAB8BQ92930 207 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 NEURL3Q96EH8 262 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 ZC3HAV1LQ96H79 300 aaKnown RBP23.11■■□□□ 1.29
U2AF1-206ENST00000464750 REXO5Q96IC2 774 aaKnown RBP23.11■■□□□ 1.29
U2AF1-206ENST00000464750 SLC35A5Q9BS91 424 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 LAT2Q9GZY6 243 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 COQ10BQ9H8M1 238 aa23.11■■□□□ 1.29
U2AF1-206ENST00000464750 GOLGA8QA0A0J9YX86 632 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 GOLGA8OA6NCC3 632 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 C9JVG2 144 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 GOLGA8NF8WBI6 632 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 HDAC3O15379 428 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 ERLIN1O75477 346 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 PABPC4LP0CB38 370 aaKnown RBP23.1■■□□□ 1.29
U2AF1-206ENST00000464750 KITP10721 976 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 NID1P14543 1247 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 EPHA3P29320 983 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 MAGOHP61326 146 aaKnown RBP23.1■■□□□ 1.29
U2AF1-206ENST00000464750 FUT5Q11128 374 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 SLC25A53Q5H9E4 307 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 ANKRD34AQ69YU3 496 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 GTF2IRD2BQ6EKJ0 949 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 SPATA19Q7Z5L4 167 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 GTF2IRD2Q86UP8 949 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 PIK3IP1Q96FE7 263 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 CCDC115Q96NT0 180 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 WDR55Q9H6Y2 383 aaPredicted RBP23.1■■□□□ 1.29
U2AF1-206ENST00000464750 C12orf49Q9H741 205 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 BTNL2Q9UIR0 455 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 WDR45Q9Y484 360 aa23.1■■□□□ 1.29
U2AF1-206ENST00000464750 ZNF469Q96JG9 3925 aaPredicted RBP23.1■■□□□ 1.29
U2AF1-206ENST00000464750 MAP1AP78559 2803 aaPredicted RBP23.1■■□□□ 1.29
U2AF1-206ENST00000464750 TRPC5OSA6NMA1 111 aa23.09■■□□□ 1.29
U2AF1-206ENST00000464750 ETV2O00321 342 aaPredicted RBP23.09■■□□□ 1.29
U2AF1-206ENST00000464750 CSTAP01040 98 aa23.09■■□□□ 1.29
U2AF1-206ENST00000464750 UBTFL6P0CB48 400 aaPredicted RBP23.09■■□□□ 1.29
U2AF1-206ENST00000464750 RIPPLY3P57055 190 aa23.09■■□□□ 1.29
U2AF1-206ENST00000464750 ATG16L1Q676U5 607 aa23.09■■□□□ 1.29
U2AF1-206ENST00000464750 TYW3Q6IPR3 259 aaKnown RBP23.09■■□□□ 1.29
U2AF1-206ENST00000464750 ROPN1LQ96C74 230 aa23.09■■□□□ 1.29
U2AF1-206ENST00000464750 THUMPD3Q9BV44 507 aaKnown RBP23.09■■□□□ 1.29
U2AF1-206ENST00000464750 TMUB1Q9BVT8 246 aa23.09■■□□□ 1.29
U2AF1-206ENST00000464750 POLE3Q9NRF9 147 aa23.09■■□□□ 1.29
U2AF1-206ENST00000464750 NKIRAS1Q9NYS0 192 aa23.09■■□□□ 1.29
U2AF1-206ENST00000464750 CD99P14209 185 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 IL12AP29459 219 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 SLC7A1P30825 629 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 SLC18A1P54219 525 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 PPP2R2AP63151 447 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 HPCAP84074 193 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 RNPS1Q15287 305 aaKnown RBP23.08■■□□□ 1.29
U2AF1-206ENST00000464750 MAPK14Q16539 360 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 EIF3MQ7L2H7 374 aaKnown RBP23.08■■□□□ 1.29
U2AF1-206ENST00000464750 STK32CQ86UX6 486 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 RAB3IL1Q8TBN0 382 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 FANCFQ9NPI8 374 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 GPR45Q9Y5Y3 372 aa23.08■■□□□ 1.29
U2AF1-206ENST00000464750 FREM1Q5H8C1 2179 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 C1QCP02747 245 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 GUSBP08236 651 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 CD53P19397 219 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 TIGD2Q4W5G0 525 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 C3orf33Q6P1S2 294 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 STAC2Q6ZMT1 411 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 FRRS1Q6ZNA5 592 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 BEND4Q6ZU67 534 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 C22orf34Q6ZV56 151 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 FCRLAQ7L513 359 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 ZNF619Q8N2I2 560 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 OIT3Q8WWZ8 545 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 ST8SIA1Q92185 356 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 TLCD1Q96CP7 247 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 PANX1Q96RD7 426 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 ZBTB18Q99592 522 aa23.07■■□□□ 1.28
U2AF1-206ENST00000464750 QRSL1Q9H0R6 528 aaKnown RBP23.07■■□□□ 1.28
U2AF1-206ENST00000464750 TMBIM4Q9HC24 238 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms