RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ARPC4-TTLL3A0A0A6YYG9 625 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 BOLA2-SMG1P6H3BVE0 249 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 NEMFO60524 1076 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 BBOX1O75936 387 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 RHOBTB1O94844 696 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 HBQ1P09105 142 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 RHOXF2BP0C7M4 288 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 THRBP10828 461 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 VDAC1P21796 283 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 PSMA5P28066 241 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 NTSP30990 170 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 HLCSP50747 726 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 ZNF133P52736 654 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-205ENST00000464541 BEX3Q00994 111 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 DMTNQ08495 405 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 SPP2Q13103 211 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 GPM6BQ13491 265 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 ADPRMQ3LIE5 342 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 CAVIN4Q5BKX8 364 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 CELF3Q5SZQ8 465 aaKnown RBP3.94□□□□□ -1.78
PTCD3-205ENST00000464541 ZCCHC12Q6PEW1 402 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 CYS1Q717R9 158 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 ANKRD37Q7Z713 158 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 CDH26Q8IXH8 852 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 IQCF2Q8IXL9 164 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 ZNF100Q8IYN0 542 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 DTNBP1Q96EV8 351 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 NOL4LQ96MY1 436 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-205ENST00000464541 SDHCQ99643 169 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-205ENST00000464541 RHOXF2Q9BQY4 288 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 COQ10BQ9H8M1 238 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 LRRC40Q9H9A6 602 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 YAE1D1Q9NRH1 226 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 FARSBQ9NSD9 589 aaKnown RBP3.94□□□□□ -1.78
PTCD3-205ENST00000464541 ZNHIT6Q9NWK9 470 aaKnown RBP3.94□□□□□ -1.78
PTCD3-205ENST00000464541 MRPL39Q9NYK5 338 aaKnown RBP3.94□□□□□ -1.78
PTCD3-205ENST00000464541 C6orf203Q9P0P8 240 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-205ENST00000464541 DCDC2Q9UHG0 476 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 TRAF3IP3Q9Y228 551 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 USP16Q9Y5T5 823 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 TTC21BQ7Z4L5 1316 aa3.94□□□□□ -1.78
PTCD3-205ENST00000464541 IGHV1OR15-1A0A075B7D0 117 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 PANO1I0J062 215 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 ZNF861PO60384 105 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 SCGB2A1O75556 95 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 AK1P00568 194 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 KRT8P05787 483 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 CLUP10909 449 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 MDKP21741 143 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-205ENST00000464541 GLRA2P23416 452 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 NMT1P30419 496 aaKnown RBP3.93□□□□□ -1.78
PTCD3-205ENST00000464541 GCKP35557 465 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 NAPAP54920 295 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 NTHL1P78549 312 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 CHIT1Q13231 466 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 TPD52L1Q16890 204 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-205ENST00000464541 LDLRAP1Q5SW96 308 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 TAS2R42Q7RTR8 314 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 SYVN1Q86TM6 617 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 CBWD2Q8IUF1 395 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 SKA3Q8IX90 412 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 CCDC71LQ8N9Z2 235 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 CCDC148Q8NFR7 591 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 MRPL38Q96DV4 380 aaKnown RBP3.93□□□□□ -1.78
PTCD3-205ENST00000464541 FICDQ9BVA6 458 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 ACTR8Q9H981 624 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 VAT1LQ9HCJ6 419 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 UTP6Q9NYH9 597 aaKnown RBP3.93□□□□□ -1.78
PTCD3-205ENST00000464541 RDH8Q9NYR8 311 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 ATXN10Q9UBB4 475 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 MGAT4BQ9UQ53 548 aa3.93□□□□□ -1.78
PTCD3-205ENST00000464541 MRPS7Q9Y2R9 242 aaKnown RBP3.93□□□□□ -1.78
PTCD3-205ENST00000464541 PIK3R4Q99570 1358 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 A0A1B0GWJ7 208 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 GZMAP12544 262 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 FUT3P21217 361 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 CYLC1P35663 651 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-205ENST00000464541 BTDP43251 543 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 MTTPP55157 894 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 LIM2P55344 173 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 HSF2Q03933 536 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 ZMYND11Q15326 602 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 CFAP157Q5JU67 520 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 LRRC8BQ6P9F7 803 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 ARSKQ6UWY0 536 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 LANCL3Q6ZV70 420 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 ARMCX2Q7L311 632 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 ZNF589Q86UQ0 364 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-205ENST00000464541 MISPQ8IVT2 679 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 OR2T33Q8NG76 320 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 OR52B4Q8NGK2 314 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 OR52M1Q8NGK5 317 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 ANP32BQ92688 251 aaKnown RBP3.92□□□□□ -1.78
PTCD3-205ENST00000464541 SLC35E1Q96K37 410 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 PLEKHF1Q96S99 279 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 CCT7Q99832 543 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 HES7Q9BYE0 225 aa3.92□□□□□ -1.78
PTCD3-205ENST00000464541 GCOM2Q9BZD3 368 aaPredicted RBP3.92□□□□□ -1.78
PTCD3-205ENST00000464541 POLR1EQ9GZS1 481 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms