RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	RPS4Y1	P22090	263 aa	Known RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	ME2	P23368	584 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	TIMP3	P35625	211 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	CRISP3	P54108	245 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	GYS2	P54840	703 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	IRX1	P78414	480 aa	Predicted RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	PON3	Q15166	354 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	BCL2A1	Q16548	175 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	GCNT6	Q5T4J0	391 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	MRPL2	Q5T653	305 aa	Known RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	ZNF836	Q6ZNA1	936 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	VRK2	Q86Y07	508 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	FNDC9	Q8TBE3	224 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	C10orf82	Q8WW14	230 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	TREX2	Q9BQ50	279 aa	Predicted RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	LAT2	Q9GZY6	243 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	FAM107B	Q9H098	131 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	CALHM2	Q9HA72	323 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	DNAJB12	Q9NXW2	375 aa	Known RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	SLC35A3	Q9Y2D2	325 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	NDUFAF1	Q9Y375	327 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	CACNA1D	Q01668	2161 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	DSPP	Q9NZW4	1301 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	LINC01387	J3KSC0	135 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	DVL2	O14641	736 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	GUSB	P08236	651 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	TFPT	P0C1Z6	253 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	COX6B1	P14854	86 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	ELK4	P28324	431 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	MTPN	P58546	118 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	SIRPA	P78324	504 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	KCNJ10	P78508	379 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	FADD	Q13158	208 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	SNTB1	Q13884	538 aa	Known RBP	13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	NFYC	Q13952	458 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	SELPLG	Q14242	412 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	CAPRIN1	Q14444	709 aa	Known RBP	13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	SGCB	Q16585	318 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	CTU2	Q2VPK5	515 aa	Known RBP	13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	DLEU7	Q6UYE1	221 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	MEX3B	Q6ZN04	569 aa	Known RBP	13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	METTL25	Q8N6Q8	603 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	OR10D3	Q8NH80	312 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	NFKBID	Q8NI38	313 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	WNT2B	Q93097	391 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	KLHL15	Q96M94	604 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	TM9SF2	Q99805	663 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	SLC39A3	Q9BRY0	314 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	RAD21L1	Q9H4I0	556 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	A4GALT	Q9NPC4	353 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	CHST11	Q9NPF2	352 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	SAR1A	Q9NR31	198 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	TMEM45A	Q9NWC5	275 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	ARMCX1	Q9P291	453 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	KLHL14	Q9P2G3	628 aa		13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	GPC6	Q9Y625	555 aa	Predicted RBP	13.65	□□□□□ -0.22
SNU13-205	ENST00000463675	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675		A0A0J9YW62	118 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	TMEM247	A6NEH6	219 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	EFNA2	O43921	213 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	CXCL13	O43927	109 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	AQP8	O94778	261 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	NTN1	O95631	604 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	DBI	P07108	87 aa	Known RBP	13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	NID1	P14543	1247 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	IL7R	P16871	459 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	EIF1	P41567	113 aa	Known RBP	13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	MAGEA8	P43361	318 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	SLC6A8	P48029	635 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	SESN3	P58005	492 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	RPS3A	P61247	264 aa	Known RBP	13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	MERTK	Q12866	999 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	KLF10	Q13118	480 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	SLC25A35	Q3KQZ1	300 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	METTL21C	Q5VZV1	264 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	SNX32	Q86XE0	403 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	PEX5L	Q8IYB4	626 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	LILRA2	Q8N149	483 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	OR52P1P	Q8NH57	321 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	OR2V1	Q8NHB1	315 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	ZNF563	Q8TA94	476 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	DNAJA3	Q96EY1	480 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	ADGRG7	Q96K78	797 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	MRGPRX4	Q96LA9	322 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	RLIM	Q9NVW2	624 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	CALML5	Q9NZT1	146 aa		13.64	□□□□□ -0.23
SNU13-205	ENST00000463675	C5orf58	C9J3I9	102 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	FBP2	O00757	339 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	HNRNPR	O43390	633 aa	Known RBP	13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	GKN3P	P0CG01	181 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	ARAF	P10398	606 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	BMP2	P12643	396 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	PRF1	P14222	555 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	PGC	P20142	388 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	CTSS	P25774	331 aa		13.63	□□□□□ -0.23
SNU13-205	ENST00000463675	AQP1	P29972	269 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms