RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 C17orf67Q0P5P2 114 aa20.76■□□□□ 0.91
SSNA1-203ENST00000463511 TMEM44Q2T9K0 475 aa20.76■□□□□ 0.91
SSNA1-203ENST00000463511 GRAMD1BQ3KR37 738 aa20.76■□□□□ 0.91
SSNA1-203ENST00000463511 APOOLQ6UXV4 268 aa20.76■□□□□ 0.91
SSNA1-203ENST00000463511 STAC2Q6ZMT1 411 aa20.76■□□□□ 0.91
SSNA1-203ENST00000463511 ANKRD46Q86W74 232 aa20.76■□□□□ 0.91
SSNA1-203ENST00000463511 OR52E6Q96RD3 313 aa20.76■□□□□ 0.91
SSNA1-203ENST00000463511 LMF2Q9BU23 707 aaKnown RBP20.76■□□□□ 0.91
SSNA1-203ENST00000463511 FREM1Q5H8C1 2179 aa20.76■□□□□ 0.91
SSNA1-203ENST00000463511 SONP18583 2426 aaKnown RBP20.75■□□□□ 0.91
SSNA1-203ENST00000463511 IGLV3-32A0A0A0MS00 114 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 GXYLT2A0PJZ3 443 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 IGKV1D-16P01601 117 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 PPP3CBP16298 524 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 GABRA3P34903 492 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 CTBP2P56545 445 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 PRR5P85299 388 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 BLOC1S3Q6QNY0 202 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 SPATA21Q7Z572 469 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 CPLX4Q7Z7G2 160 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 VPS37AQ8NEZ2 397 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 NUP43Q8NFH3 380 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 OR10D3Q8NH80 312 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 PIK3R3Q92569 461 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 SLC9A6Q92581 669 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 GMPPAQ96IJ6 420 aaPredicted RBP20.75■□□□□ 0.91
SSNA1-203ENST00000463511 FAM107BQ9H098 131 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 NSRP1Q9H0G5 558 aaKnown RBP20.75■□□□□ 0.91
SSNA1-203ENST00000463511 C3orf14Q9HBI5 128 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 SLC52A3Q9NQ40 469 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 EQTNQ9NQ60 294 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 PLSCR4Q9NRQ2 329 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 TMEM45AQ9NWC5 275 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 CCDC167Q9P0B6 97 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 BTNL2Q9UIR0 455 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 ADAM21Q9UKJ8 722 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 COL6A5A8TX70 2615 aa20.75■□□□□ 0.91
SSNA1-203ENST00000463511 SS18L1O75177 396 aaPredicted RBP20.74■□□□□ 0.91
SSNA1-203ENST00000463511 CPSF4O95639 269 aaKnown RBP20.74■□□□□ 0.91
SSNA1-203ENST00000463511 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.74■□□□□ 0.91
SSNA1-203ENST00000463511 AGKQ53H12 422 aa20.74■□□□□ 0.91
SSNA1-203ENST00000463511 GALNT10Q86SR1 603 aa20.74■□□□□ 0.91
SSNA1-203ENST00000463511 WFDC8Q8IUA0 241 aa20.74■□□□□ 0.91
SSNA1-203ENST00000463511 FAM120BQ96EK7 910 aaKnown RBP20.74■□□□□ 0.91
SSNA1-203ENST00000463511 PLPPR2Q96GM1 343 aa20.74■□□□□ 0.91
SSNA1-203ENST00000463511 CCDC115Q96NT0 180 aa20.74■□□□□ 0.91
SSNA1-203ENST00000463511 CXorf56Q9H5V9 222 aa20.74■□□□□ 0.91
SSNA1-203ENST00000463511 STOML1Q9UBI4 398 aa20.74■□□□□ 0.91
SSNA1-203ENST00000463511 ATRQ13535 2644 aa20.74■□□□□ 0.91
SSNA1-203ENST00000463511 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 SNX3O60493 162 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 KCNH1O95259 989 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 OPN1LWP04000 364 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 NID1P14543 1247 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 PAX1P15863 534 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 ZNF17P17021 662 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 CCT3P49368 545 aaKnown RBP20.73■□□□□ 0.91
SSNA1-203ENST00000463511 ATP5J2P56134 94 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 OR4A15Q8NGL6 344 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 VPS33AQ96AX1 596 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 GIMAP5Q96F15 307 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 NPAS1Q99742 590 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 INPP5KQ9BT40 448 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 ACTR6Q9GZN1 396 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 RABEP2Q9H5N1 569 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 SAR1AQ9NR31 198 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 ZNF701Q9NV72 531 aaPredicted RBP20.73■□□□□ 0.91
SSNA1-203ENST00000463511 MCTS1Q9ULC4 181 aaKnown RBP20.73■□□□□ 0.91
SSNA1-203ENST00000463511 PCDHGB4Q9UN71 923 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 SNX8Q9Y5X2 465 aa20.73■□□□□ 0.91
SSNA1-203ENST00000463511 FBN1P35555 2871 aaKnown RBP20.73■□□□□ 0.91
SSNA1-203ENST00000463511 HS3ST1O14792 307 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 PRKAG1P54619 331 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 NR1H2P55055 460 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 CTU2Q2VPK5 515 aaKnown RBP20.72■□□□□ 0.91
SSNA1-203ENST00000463511 TIGD2Q4W5G0 525 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 MSANTD1Q6ZTZ1 278 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 PIGWQ7Z7B1 504 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 SFXN5Q8TD22 340 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 GPR151Q8TDV0 419 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 ADGRG7Q96K78 797 aa20.72■□□□□ 0.91
SSNA1-203ENST00000463511 ZCCHC3Q9NUD5 404 aaKnown RBP20.72■□□□□ 0.91
SSNA1-203ENST00000463511 ANK3Q12955 4377 aaKnown RBP20.71■□□□□ 0.91
SSNA1-203ENST00000463511 NR5A2O00482 541 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 CXCL13O43927 109 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 SHOX2O60902 331 aaPredicted RBP20.71■□□□□ 0.91
SSNA1-203ENST00000463511 CDKN2CP42773 168 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 LRRC74AQ0VAA2 488 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 CXXC5Q7LFL8 322 aaKnown RBP20.71■□□□□ 0.91
SSNA1-203ENST00000463511 CLEC4FQ8N1N0 589 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 ZNF611Q8N823 705 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 GATSQ8NAP1 163 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 HOXB13Q92826 284 aaPredicted RBP20.71■□□□□ 0.91
SSNA1-203ENST00000463511 SPDL1Q96EA4 605 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 MS4A4EQ96PG1 132 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 C12orf49Q9H741 205 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 TMEM185BQ9H7F4 350 aa20.71■□□□□ 0.91
SSNA1-203ENST00000463511 A0A087WZY1 265 aa20.7■□□□□ 0.9
SSNA1-203ENST00000463511 TNFSF11O14788 317 aa20.7■□□□□ 0.9
SSNA1-203ENST00000463511 NDUFB5O43674 189 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms