RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ACER3Q9NUN7 267 aa11.77□□□□□ -0.53
R3HDM1-213ENST00000463230 KLHL14Q9P2G3 628 aa11.77□□□□□ -0.53
R3HDM1-213ENST00000463230 HCFC1P51610 2035 aa11.77□□□□□ -0.53
R3HDM1-213ENST00000463230 SLC22A2O15244 555 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 THBS1P07996 1170 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 ETFAP13804 333 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 NID1P14543 1247 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF136P52737 540 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 FOXF1Q12946 379 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 SELENBP1Q13228 472 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 MAPK14Q16539 360 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 LIN52Q52LA3 116 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 P4HA3Q7Z4N8 544 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 BBS10Q8TAM1 723 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 WDR60Q8WVS4 1066 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 SLC35B4Q969S0 331 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 THOC1Q96FV9 657 aaKnown RBP11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 ADGRG7Q96K78 797 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 ARMC7Q9H6L4 198 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 NDUFAF1Q9Y375 327 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 EVPLLA8MZ36 301 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 ANGPT2O15123 496 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 SNRPB2P08579 225 aaKnown RBP11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 UQCRBP14927 111 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 SUCLG1P53597 346 aaKnown RBP11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 CLDN15P56746 228 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 QPRTQ15274 297 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 MAPRE2Q15555 327 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 COQ5Q5HYK3 327 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 POMZP3Q6PJE2 187 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 UBQLNLQ8IYU4 475 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 NAXEQ8NCW5 288 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 OR5M1Q8NGP8 315 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 OR2V1Q8NHB1 315 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 FBXO27Q8NI29 283 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 SLC38A5Q8WUX1 472 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 KLHL15Q96M94 604 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 THUMPD3Q9BV44 507 aaKnown RBP11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 TIGARQ9NQ88 270 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 GLRX2Q9NS18 164 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 SLC25A37Q9NYZ2 338 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 IFT52Q9Y366 437 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 SETXQ7Z333 2677 aaKnown RBP11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 MED12Q93074 2177 aa11.76□□□□□ -0.53
R3HDM1-213ENST00000463230 CENPVL1A0A0U1RR11 272 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 SYT5O00445 386 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 SEC14L5O43304 696 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 GMFGO60234 142 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 GPX2P18283 190 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 COL8A1P27658 744 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 HTR3AP46098 478 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 CLDN20P56880 219 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 GUCA2AQ02747 115 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 MAPK11Q15759 364 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 PAGE3Q5JUK9 113 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 GCNT6Q5T4J0 391 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 RNF220Q5VTB9 566 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 LIX1LQ8IVB5 337 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 MSRB3Q8IXL7 192 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 RELL2Q8NC24 303 aaPredicted RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 SLC25A43Q8WUT9 341 aaPredicted RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 MARVELD3Q96A59 401 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 AURKBQ96GD4 344 aaPredicted RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF317Q96PQ6 595 aaPredicted RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 SERINC1Q9NRX5 453 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 JKAMPQ9P055 326 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 MCTS1Q9ULC4 181 aaKnown RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 SPIN1Q9Y657 262 aaPredicted RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 NKX2-6A6NCS4 301 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 BBIP1A8MTZ0 92 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 KDM4EB2RXH2 506 aaPredicted RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 SYNGR4O95473 234 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 C1QCP02747 245 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 BCHEP06276 602 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 UBTFL6P0CB48 400 aaPredicted RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 ARAFP10398 606 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 ETS2P15036 469 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 IL7RP16871 459 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 CCR4P51679 360 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 MAP2K6P52564 334 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 LARS2Q15031 903 aaKnown RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 CTU2Q2VPK5 515 aaKnown RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 NDUFAF6Q330K2 333 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF787Q6DD87 383 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 CGB2Q6NT52 195 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 DLEU7Q6UYE1 221 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 RNASE6Q93091 150 aaKnown RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 PINK1Q9BXM7 581 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 ALG2Q9H553 416 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 TMEM38AQ9H6F2 299 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 EVA1AQ9H8M9 152 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 RNF122Q9H9V4 155 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 VAPAQ9P0L0 249 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 ZNF232Q9UNY5 417 aa11.75□□□□□ -0.53
R3HDM1-213ENST00000463230 C19orf84I3L1E1 186 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 EIF1AYO14602 144 aaKnown RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 RRP9O43818 475 aaKnown RBP11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 NPPAP01160 153 aa11.74□□□□□ -0.53
R3HDM1-213ENST00000463230 PABPC4LP0CB38 370 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms