RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 METTL27Q8N6F8 245 aaPredicted RBP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 FIG4Q92562 907 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 NEURL3Q96EH8 262 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 NSMCE2Q96MF7 247 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 C5orf34Q96MH7 638 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 EDEM2Q9BV94 578 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 GORASP2Q9H8Y8 452 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 TMEM9BQ9NQ34 198 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 GAR1Q9NY12 217 aaKnown RBP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 STX18Q9P2W9 335 aaKnown RBP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 CDC14AQ9UNH5 594 aa6.78□□□□□ -1.32
UBE4B-204ENST00000462658 MRPS33Q9Y291 106 aaKnown RBP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 TMEM184BQ9Y519 407 aaPredicted RBP6.78□□□□□ -1.32
UBE4B-204ENST00000462658 D6RAR5 112 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 H3BNX3 289 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 CLDN4O14493 209 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 DSCR3O14972 297 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 EMC8O43402 210 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 FGF17O60258 216 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 B4GALT2O60909 372 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 CTNSO60931 367 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 LDB3O75112 727 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 CREG1O75629 220 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 BAG2O95816 211 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 UMPSP11172 480 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ETFAP13804 333 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ANPEPP15144 967 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 PPP2R1BP30154 601 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 CSTF2P33240 577 aaKnown RBP eCLIP6.77□□□□□ -1.33
UBE4B-204ENST00000462658 PTGER1P34995 402 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 CASP9P55211 416 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 POLE2P56282 527 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ID2Q02363 134 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 SLC34A1Q06495 639 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ZFP36L1Q07352 338 aaKnown RBP6.77□□□□□ -1.33
UBE4B-204ENST00000462658 RBBP4Q09028 425 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 FADDQ13158 208 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ERV3-1Q14264 604 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 SEC23BQ15437 767 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 LTB4RQ15722 352 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 SYT16Q17RD7 645 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 BHLHB9Q6PI77 547 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 TMEM107Q6UX40 140 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 TMEM64Q6YI46 380 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 SZRD1Q7Z422 152 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 PTOV1Q86YD1 416 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 NAXDQ8IW45 347 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ZNF595Q8IYB9 648 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 OR9A2Q8NGT5 310 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 OR51Q1Q8NH59 317 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 SFXN5Q8TD22 340 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 NPIPB3Q92617 1050 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 NCLNQ969V3 563 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 FAM162AQ96A26 154 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ANKRD9Q96BM1 317 aaPredicted RBP6.77□□□□□ -1.33
UBE4B-204ENST00000462658 MOAP1Q96BY2 351 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 TBC1D20Q96BZ9 403 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ELP4Q96EB1 424 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 DUS3LQ96G46 650 aaKnown RBP6.77□□□□□ -1.33
UBE4B-204ENST00000462658 MAGED4Q96JG8 741 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 OR6C1Q96RD1 312 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 EFHD1Q9BUP0 239 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 SLC7A5P2Q9GIP4 190 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 C3orf14Q9HBI5 128 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ZNF304Q9HCX3 659 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 PRTFDC1Q9NRG1 225 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ZCCHC3Q9NUD5 404 aaKnown RBP6.77□□□□□ -1.33
UBE4B-204ENST00000462658 DHCR7Q9UBM7 475 aaKnown RBP6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ANGPTL2Q9UKU9 493 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 RARRES3Q9UL19 164 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 FAF1Q9UNN5 650 aaPredicted RBP6.77□□□□□ -1.33
UBE4B-204ENST00000462658 AP4S1Q9Y587 144 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 MAU2Q9Y6X3 613 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 ASXL3Q9C0F0 2248 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 LAMA5O15230 3695 aa6.77□□□□□ -1.33
UBE4B-204ENST00000462658 SCN3AQ9NY46 2000 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 ZFHX4Q86UP3 3567 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 A0A1B0GX78 115 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 DHRS12A0PJE2 317 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 GXYLT2A0PJZ3 443 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 C4orf47A7E2U8 309 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 EFCAB7A8K855 629 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 MASP2O00187 686 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 PLOD2O00469 737 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 LRP3O75074 770 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 ATP1B1P05026 303 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 GPIP06744 558 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 FHP07954 510 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 SLC35E2P0CK97 266 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 NT5EP21589 574 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 MATN1P21941 496 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 IL10P22301 178 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 KDELR2P33947 212 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 PCGF2P35227 344 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 THBS4P35443 961 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 XCR1P46094 333 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 OR1D4P47884 311 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 DSTNP60981 165 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 STX4Q12846 297 aa6.76□□□□□ -1.33
UBE4B-204ENST00000462658 VEZF1Q14119 521 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms