RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 COL28A1Q2UY09 1125 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 ZNF766Q5HY98 468 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 ENTPD8Q5MY95 495 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 CBLN3Q6UW01 205 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 DEF8Q6ZN54 512 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 PLEKHM3Q6ZWE6 761 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 COMTD1Q86VU5 262 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 SVOPLQ8N434 492 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 TMCO5AQ8N6Q1 288 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 WDSUB1Q8N9V3 476 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 GATSQ8NAP1 163 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 FAM98AQ8NCA5 519 aaKnown RBP9.73□□□□□ -0.85
RTF1-202ENST00000462276 OR1J4Q8NGS1 313 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 VANGL1Q8TAA9 524 aaPredicted RBP9.73□□□□□ -0.85
RTF1-202ENST00000462276 GPR119Q8TDV5 335 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 ADAMTS16Q8TE57 1224 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 ZBTB8AQ96BR9 441 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 MRGPRX4Q96LA9 322 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 HS6ST2Q96MM7 605 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 EPYCQ99645 322 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 RTN4RQ9BZR6 473 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 GALNT9Q9HCQ5 603 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 ACER3Q9NUN7 267 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 ANKRD10Q9NXR5 420 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 QPCTLQ9NXS2 382 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 PLA2G3Q9NZ20 509 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 STOML1Q9UBI4 398 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 RIMS3Q9UJD0 308 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 A4GNTQ9UNA3 340 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 PTPRQQ9UMZ3 2332 aa9.73□□□□□ -0.85
RTF1-202ENST00000462276 C7orf72A4D263 438 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 LINC01387J3KSC0 135 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 CHP2O43745 196 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 PEX1O43933 1283 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 TPST2O60704 377 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 E2F6O75461 281 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 ATP6V1G2O95670 118 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 NUDT14O95848 222 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 GKN3PP0CG01 181 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 GP1BBP13224 206 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 PRG2P13727 222 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 TNFRSF1BP20333 461 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 RYKP34925 604 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 IFNGR2P38484 337 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 RBM34P42696 430 aaKnown RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 IDH2P48735 452 aaKnown RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 CCR4P51679 360 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 ZNF41P51814 821 aaPredicted RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 PLAURQ03405 335 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 PIN1Q13526 163 aaPredicted RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 NPTX1Q15818 432 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 INAQ16352 499 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 SLC25A53Q5H9E4 307 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 PRAMEF20Q5VT98 475 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 BICRALQ6AI39 1079 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 C5orf46Q6UWT4 87 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 GRINAQ7Z429 371 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 TSEN54Q7Z6J9 526 aaKnown RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 ZNF605Q86T29 641 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 HIPK1Q86Z02 1210 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 RBM45Q8IUH3 476 aaKnown RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 ZDHHC13Q8IUH4 622 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 LACC1Q8IV20 430 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 RNF113BQ8IZP6 322 aaKnown RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 ZFP62Q8NB50 900 aaPredicted RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 OR2M7Q8NG81 312 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 OR2M3Q8NG83 312 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 OR4D11Q8NGI4 311 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 ZNF563Q8TA94 476 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 SLC38A4Q969I6 547 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 SDCCAG3Q96C92 435 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 C1GALT1C1Q96EU7 318 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 SH3YL1Q96HL8 342 aaPredicted RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 SIGLEC12Q96PQ1 595 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 SLC19A3Q9BZV2 496 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 ADAM19Q9H013 955 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 TAS2R10Q9NYW0 307 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 TMCC3Q9ULS5 477 aa9.72□□□□□ -0.85
RTF1-202ENST00000462276 SAMHD1Q9Y3Z3 626 aaKnown RBP9.72□□□□□ -0.85
RTF1-202ENST00000462276 PCSK5Q92824 1860 aa9.71□□□□□ -0.85
RTF1-202ENST00000462276 ZFYVE26Q68DK2 2539 aa9.71□□□□□ -0.85
RTF1-202ENST00000462276 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 A0A0B4J2E0 115 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 A0A1B0GWA3 101 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 A0A1B0GX12 115 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 ARRDC5A6NEK1 342 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 TNFRSF11BO00300 401 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 FFAR1O14842 300 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 FRS3O43559 492 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 SEMA7AO75326 666 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 BCAS1O75363 584 aaPredicted RBP9.71□□□□□ -0.86
RTF1-202ENST00000462276 GADD45GO95257 159 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 IGF2P01344 180 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 FPR1P21462 350 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 SRD5A2P31213 254 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 RRM2P31350 389 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 APOBEC1P41238 236 aaKnown RBP9.71□□□□□ -0.86
RTF1-202ENST00000462276 POLR2HP52434 150 aaKnown RBP9.71□□□□□ -0.86
RTF1-202ENST00000462276 SESN3P58005 492 aa9.71□□□□□ -0.86
RTF1-202ENST00000462276 SPIBQ01892 262 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms