RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CPPED1Q9BRF8 314 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 PINK1Q9BXM7 581 aa9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 PRRG4Q9BZD6 226 aa9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 NSRP1Q9H0G5 558 aaKnown RBP9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 TMEM185BQ9H7F4 350 aa9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 A4GALTQ9NPC4 353 aa9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 SAR1AQ9NR31 198 aa9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 PAQR5Q9NXK6 330 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 CLCF1Q9UBD9 225 aa9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 SPTBN1Q01082 2364 aaKnown RBP9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 PTPN13Q12923 2485 aa9.54□□□□□ -0.88
TRAPPC12-213ENST00000461577 TRBV5-3A0A0A0MS03 114 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 CLDN24A6NM45 220 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 GJE1A6NN92 205 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 H0YC42 278 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 TNFSF11O14788 317 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 RCBTB2O95199 551 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 SYNGR4O95473 234 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 NUDT7P0C024 238 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 BMP2P12643 396 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 NID1P14543 1247 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 COX6B1P14854 86 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 BMP5P22003 454 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 RPS4Y1P22090 263 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 PSMA4P25789 261 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ADSLP30566 484 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 RYKP34925 604 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 SFTPDP35247 375 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 OPRM1P35372 400 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ZNF136P52737 540 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 TPD52P55327 224 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 CLDN15P56746 228 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 SELENBP1Q13228 472 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 LARS2Q15031 903 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 MAPK11Q15759 364 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 RUNDC3AQ59EK9 446 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 SLC25A53Q5H9E4 307 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 RPS26P11Q5JNZ5 115 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 MRPL2Q5T653 305 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 PRAMEF8Q5VWM4 474 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 PRAMEF7Q5VXH5 474 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 HBMQ6B0K9 141 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ZNF787Q6DD87 383 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 OR2A2Q6IF42 318 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 DLEU7Q6UYE1 221 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ESPNLQ6ZVH7 1005 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ADGRE4PQ86SQ3 457 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 GGNQ86UU5 652 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 RETREG3Q86VR2 466 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 VRK2Q86Y07 508 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 LILRA2Q8N149 483 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 METTL25Q8N6Q8 603 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 NAXEQ8NCW5 288 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 FAM71CQ8NEG0 241 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 OR2V1Q8NHB1 315 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 NFKBIDQ8NI38 313 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 BBS10Q8TAM1 723 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ST8SIA1Q92185 356 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 CNOT9Q92600 299 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 MAL2Q969L2 176 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 INTS12Q96CB8 462 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 LRRC46Q96FV0 321 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 KLHL15Q96M94 604 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 CGREF1Q99674 301 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 TREX2Q9BQ50 279 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ELAC2Q9BQ52 826 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ARMC7Q9H6L4 198 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 EXOSC3Q9NQT5 275 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 SERINC1Q9NRX5 453 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ACER3Q9NUN7 267 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ZNF629Q9UEG4 869 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 ZNF443Q9Y2A4 671 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 IFT52Q9Y366 437 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 CAPN7Q9Y6W3 813 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 USP9YO00507 2555 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 HCFC1P51610 2035 aa9.53□□□□□ -0.88
TRAPPC12-213ENST00000461577 MED12LQ86YW9 2145 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 BBIP1A8MTZ0 92 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 C19orf84I3L1E1 186 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 HNRNPRO43390 633 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 CXCL13O43927 109 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 CCDC22O60826 627 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 DNAJA2O60884 412 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 BCAS1O75363 584 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 TGM6O95932 706 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 IL18BPO95998 194 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 THBS1P07996 1170 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 ARAFP10398 606 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 FCGR2AP12318 317 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 UQCRBP14927 111 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 GPX2P18283 190 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 IL11P20809 199 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 SLC6A2P23975 617 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 IDH2P48735 452 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 AGFG1P52594 562 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 SESN3P58005 492 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 GNGT1P63211 74 aa9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 EEF1A1P68104 462 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-213ENST00000461577 CDK6Q00534 326 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms