RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 PRKCAP17252 672 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 ELK4P28324 431 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 ADH6P28332 368 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 RPS3AP61247 264 aaKnown RBP16.61■□□□□ 0.25
DDR1-241ENST00000460944 SCARB2Q14108 478 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 ZSWIM7Q19AV6 140 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 MRPL2Q5T653 305 aaKnown RBP16.61■□□□□ 0.25
DDR1-241ENST00000460944 RIPPLY2Q5TAB7 128 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 KRT73Q86Y46 540 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 FBXO27Q8NI29 283 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 ZNF563Q8TA94 476 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 TMEM234Q8WY98 164 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 ST8SIA1Q92185 356 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 MRGPRX4Q96LA9 322 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 PSMG3-AS1Q96PY0 264 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 TUBA1CQ9BQE3 449 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 CALHM2Q9HA72 323 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 RNF6Q9Y252 685 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 ANGPT4Q9Y264 503 aa16.61■□□□□ 0.25
DDR1-241ENST00000460944 ZNF443Q9Y2A4 671 aaPredicted RBP16.61■□□□□ 0.25
DDR1-241ENST00000460944 INTS1Q8N201 2190 aaKnown RBP16.6■□□□□ 0.25
DDR1-241ENST00000460944 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 CLCA1A8K7I4 914 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 PGM3O95394 542 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 IL2RAP01589 272 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 ETS2P15036 469 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 CHRNB4P30926 498 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 RYKP34925 604 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 RAC1P63000 192 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 RBBP4Q09028 425 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 SELPLGQ14242 412 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 TOMM34Q15785 309 aaPredicted RBP16.6■□□□□ 0.25
DDR1-241ENST00000460944 MAMDC2Q7Z304 686 aaPredicted RBP16.6■□□□□ 0.25
DDR1-241ENST00000460944 VRK2Q86Y07 508 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 ZNF440Q8IYI8 595 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 C10orf111Q8N326 155 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 POU5F2Q8N7G0 328 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 C11orf65Q8NCR3 313 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 HIPK4Q8NE63 616 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 OR8J3Q8NGG0 315 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 POC1BQ8TC44 478 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 CA5BP1Q8WTZ4 195 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 CNOT9Q92600 299 aaKnown RBP16.6■□□□□ 0.25
DDR1-241ENST00000460944 RCN3Q96D15 328 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 SPATA5L1Q9BVQ7 753 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 CCDC106Q9BWC9 280 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 TRIM8Q9BZR9 551 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 DNAJB12Q9NXW2 375 aaKnown RBP16.6■□□□□ 0.25
DDR1-241ENST00000460944 ARL2BPQ9Y2Y0 163 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 FLNBO75369 2602 aaKnown RBP16.6■□□□□ 0.25
DDR1-241ENST00000460944 HECTD1Q9ULT8 2610 aa16.6■□□□□ 0.25
DDR1-241ENST00000460944 GJE1A6NN92 205 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 HSPB2A8KAH6 182 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 EIF1AYO14602 144 aaKnown RBP16.59■□□□□ 0.25
DDR1-241ENST00000460944 DNAJA2O60884 412 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 BCAS1O75363 584 aaPredicted RBP16.59■□□□□ 0.25
DDR1-241ENST00000460944 CLDN14O95500 239 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 PABPC4LP0CB38 370 aaKnown RBP16.59■□□□□ 0.25
DDR1-241ENST00000460944 COX4I1P13073 169 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 PSMA4P25789 261 aaKnown RBP16.59■□□□□ 0.25
DDR1-241ENST00000460944 HSPB2Q16082 182 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 ZNF311Q5JNZ3 666 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 PDSS1Q5T2R2 415 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 RNF220Q5VTB9 566 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 NANOGP8Q6NSW7 305 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 ZNF836Q6ZNA1 936 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 P4HA3Q7Z4N8 544 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 SERPINA11Q86U17 422 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 MED12LQ86YW9 2145 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 GRAMD2AQ8IUY3 354 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 ZNF607Q96SK3 696 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 NPAS1Q99742 590 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 SLC39A3Q9BRY0 314 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 SPATA9Q9BWV2 254 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 KAT8Q9H7Z6 458 aaKnown RBP16.59■□□□□ 0.25
DDR1-241ENST00000460944 NANOGQ9H9S0 305 aa16.59■□□□□ 0.25
DDR1-241ENST00000460944 SETXQ7Z333 2677 aaKnown RBP16.58■□□□□ 0.25
DDR1-241ENST00000460944 CDHR4A6H8M9 788 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 MBD3L4A6NDZ8 208 aaPredicted RBP16.58■□□□□ 0.24
DDR1-241ENST00000460944 MBD3L3A6NE82 208 aaPredicted RBP16.58■□□□□ 0.24
DDR1-241ENST00000460944 MBD3L5A6NJ08 208 aaPredicted RBP16.58■□□□□ 0.24
DDR1-241ENST00000460944 FXYD1O00168 92 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 GP1BBP13224 206 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 TIMP3P35625 211 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 CLDN20P56880 219 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 SESN3P58005 492 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 EEF1A1P68104 462 aaKnown RBP16.58■□□□□ 0.24
DDR1-241ENST00000460944 SELENBP1Q13228 472 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 ART3Q13508 389 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 SGCBQ16585 318 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 SLC25A53Q5H9E4 307 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 SEM1Q6ZVN7 128 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 PIGWQ7Z7B1 504 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 CCDC71Q8IV32 467 aaPredicted RBP16.58■□□□□ 0.24
DDR1-241ENST00000460944 SLC30A8Q8IWU4 369 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 OR10A6Q8NH74 314 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 MBD3L2Q8NHZ7 208 aaPredicted RBP16.58■□□□□ 0.24
DDR1-241ENST00000460944 WNT2BQ93097 391 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 CMTM5Q96DZ9 223 aa16.58■□□□□ 0.24
DDR1-241ENST00000460944 ECSITQ9BQ95 431 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms