RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 ATP6V1B2P21281 511 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 SUMO3P55854 103 aaPredicted RBP9.08□□□□□ -0.96
EPB41-208ENST00000460378 DUSP2Q05923 314 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 RBBP4Q09028 425 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 FADDQ13158 208 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 TBC1D28Q2M2D7 210 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 SPNS3Q6ZMD2 512 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 OR5M1Q8NGP8 315 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 FBXO27Q8NI29 283 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 RNASE6Q93091 150 aaKnown RBP9.08□□□□□ -0.96
EPB41-208ENST00000460378 KCNA7Q96RP8 456 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 SH3GL2Q99962 352 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 IFT27Q9BW83 186 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 CACNA1AO00555 2505 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 NBASA2RRP1 2371 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 RPS6KA3P51812 740 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 SLC16A14Q7RTX9 510 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 TMEM251Q8N6I4 163 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 SMYD1Q8NB12 490 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 SPSB2Q99619 263 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 SMAD5Q99717 465 aaKnown RBP9.08□□□□□ -0.96
EPB41-208ENST00000460378 MECRQ9BV79 373 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 ELOVL3Q9HB03 270 aa9.08□□□□□ -0.96
EPB41-208ENST00000460378 SIDT1Q9NXL6 827 aaKnown RBP9.08□□□□□ -0.96
EPB41-208ENST00000460378 MTCL1Q9Y4B5 1905 aaKnown RBP9.07□□□□□ -0.96
EPB41-208ENST00000460378 LOC102725191A0A1B0GVB3 256 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 hCG_1809904A0A1W2PP81 198 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 A0A1W2PPE2 198 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 A0A1W2PR64 198 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 A0A1W2PRV1 198 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 G6PDP11413 515 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 TACR1P25103 407 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 STARP49675 285 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 KLHL12Q53G59 568 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 PIGGQ5H8A4 983 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 ALG10BQ5I7T1 473 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 RINLQ6ZS11 566 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 OAFQ86UD1 273 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 EXOC3L1Q86VI1 746 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 NEIL3Q8TAT5 605 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 PYDC1Q8WXC3 89 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 MRGPRX4Q96LA9 322 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 DDX31Q9H8H2 851 aaKnown RBP9.07□□□□□ -0.96
EPB41-208ENST00000460378 TMEM181Q9P2C4 612 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 TNFRSF10DQ9UBN6 386 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 RP1P56715 2156 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 PLOD2O00469 737 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 CLDN17P56750 224 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 TDRPQ86YL5 185 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 EID2BQ96D98 161 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 PNPOQ9NVS9 261 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 FAM96BQ9Y3D0 163 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 RAD51DO75771 328 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 PTGES3Q15185 160 aaKnown RBP9.07□□□□□ -0.96
EPB41-208ENST00000460378 PDZK1Q5T2W1 519 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 SWT1Q5T5J6 900 aaKnown RBP9.07□□□□□ -0.96
EPB41-208ENST00000460378 ZNF813Q6ZN06 617 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 Q6ZS92 163 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 CLVS1Q8IUQ0 354 aaPredicted RBP9.07□□□□□ -0.96
EPB41-208ENST00000460378 TMEM139Q8IV31 216 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 WNT2BQ93097 391 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 SGTBQ96EQ0 304 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 C10orf90Q96M02 699 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 PIGUQ9H490 435 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 IGSF5Q9NSI5 407 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 ATRXP46100 2492 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 SPTAN1Q13813 2472 aaKnown RBP9.07□□□□□ -0.96
EPB41-208ENST00000460378 TCRBV16S1A1N1A0A5B0 115 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 A6NIZ1 184 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 PSMG1O95456 288 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 PROCP04070 461 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 RAP1BP61224 184 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 RAP1AP62834 184 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 CEBPEQ15744 281 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 IFI44LQ53G44 452 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 FAM180BQ6P0A1 224 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 DTX1Q86Y01 620 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 CENPSQ8N2Z9 138 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 ST8SIA1Q92185 356 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 ROPN1LQ96C74 230 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 TAS2R16Q9NYV7 291 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 AMDHD2Q9Y303 409 aa9.07□□□□□ -0.96
EPB41-208ENST00000460378 OR6C70A6NIJ9 312 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 EFCAB9A8MZ26 197 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 PLPP1O14494 284 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 RCBTB2O95199 551 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 PGRP06401 933 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 IFNGR1P15260 489 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 GSTT1P30711 240 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 QPRTQ15274 297 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 LCN1P1Q5VSP4 162 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 BHLHA15Q7RTS1 189 aaPredicted RBP9.06□□□□□ -0.96
EPB41-208ENST00000460378 C17orf82Q86X59 251 aaPredicted RBP9.06□□□□□ -0.96
EPB41-208ENST00000460378 OR52N5Q8NH56 324 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 OR5W2Q8NH69 310 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 TM4SF18Q96CE8 201 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 DENND2DQ9H6A0 471 aaPredicted RBP9.06□□□□□ -0.96
EPB41-208ENST00000460378 ETAA1Q9NY74 926 aa9.06□□□□□ -0.96
EPB41-208ENST00000460378 CMAHPQ9Y471 501 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms