RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF767PQ75MW2 155 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 NLRP8Q86W28 1048 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 ZDHHC5Q9C0B5 715 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 SYNPO2LQ9H987 977 aa13.8□□□□□ -0.2
PTPRU-205ENST00000460170 CENPBD1B2RD01 187 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 F5H0A9 414 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 EGFP01133 1207 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 TNFRSF4P43489 277 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 GPR19Q15760 415 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 SLC48A1Q6P1K1 146 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 DGLUCYQ7Z3D6 616 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 BEST3Q8N1M1 668 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 FTMTQ8N4E7 242 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 NXPE3Q969Y0 559 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 SLC25A18Q9H1K4 315 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 NAP1L6A6NFF2 107 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 CHP2O43745 196 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 MRPS21P82921 87 aaKnown RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 TLE3Q04726 772 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 CTU2Q2VPK5 515 aaKnown RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 NRARPQ7Z6K4 114 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 RIMKLAQ8IXN7 391 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 TMEFF1Q8IYR6 380 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 TRIM43Q96BQ3 446 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 DDIT4LQ96D03 193 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 NDRG4Q9ULP0 352 aaKnown RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 DEFB133Q30KQ1 61 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 PLEKHN1Q494U1 663 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 RAET1LQ5VY80 246 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 STEAP3Q658P3 488 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 SLC6A19Q695T7 634 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 ADAMTS14Q8WXS8 1223 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 LMAN1LQ9HAT1 526 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 UBQLN4Q9NRR5 601 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF701Q9NV72 531 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 A0A1B0GVC2 190 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 A6NIN4 97 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 CPNE6O95741 557 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 AMY2AP04746 511 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 PRKAR1BP31321 381 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 CAV3P56539 151 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF322Q6U7Q0 402 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 P4HA3Q7Z4N8 544 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 ADIPOR2Q86V24 386 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 TPRA1Q86W33 373 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 TBC1D20Q96BZ9 403 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 INTS14Q96SY0 518 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 TXNL4BQ9NX01 149 aaKnown RBP13.79□□□□□ -0.2
PTPRU-205ENST00000460170 SAGE1Q9NXZ1 904 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 SNX11Q9Y5W9 270 aa13.79□□□□□ -0.2
PTPRU-205ENST00000460170 TVP23AA6NH52 213 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 SRPX2O60687 465 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-205ENST00000460170 SYPP08247 313 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 Q6ZNB5 142 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 LINC00299Q6ZSB3 139 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 OR5T2Q8NGG2 359 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 PDXPQ96GD0 296 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 TMEM185BQ9H7F4 350 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 NT5DC2Q9H857 520 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 SIDT1Q9NXL6 827 aaKnown RBP13.78□□□□□ -0.2
PTPRU-205ENST00000460170 NUP50Q9UKX7 468 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 KCNIP3Q9Y2W7 256 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 LOC105369274A0A096LPK9 316 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-205ENST00000460170 PET100P0DJ07 73 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 MAOBP27338 520 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 AGTR1P30556 359 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 BCL6P41182 706 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 TSFMP43897 325 aaKnown RBP13.78□□□□□ -0.2
PTPRU-205ENST00000460170 RPS25P62851 125 aaKnown RBP13.78□□□□□ -0.2
PTPRU-205ENST00000460170 HSD11B2P80365 405 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 PCGF3Q3KNV8 242 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 WBP2NLQ6ICG8 309 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 OR4N4Q8N0Y3 316 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 CLDN22Q8N7P3 220 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 ELP4Q96EB1 424 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 ZNF717Q9BY31 904 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-205ENST00000460170 IL21Q9HBE4 155 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 PCDHGA3Q9Y5H0 932 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 SSC5DA1L4H1 1573 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 LOC102723532A0A0G2JNH3 316 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 ACOT7O00154 380 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 CD3GP09693 182 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 OPRD1P41143 372 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 MRPS10P82664 201 aaKnown RBP13.78□□□□□ -0.2
PTPRU-205ENST00000460170 TDGQ13569 410 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 METTL11BQ5VVY1 283 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 LAX1Q8IWV1 398 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 CCDC54Q8NEL0 328 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 NAA11Q9BSU3 229 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-205ENST00000460170 SLA2Q9H6Q3 261 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 BLACEA4D250 179 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 LINC01553A4QN01 128 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 JMJD7P0C870 316 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 AMY2BP19961 511 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 GRK5P34947 590 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 PDX1P52945 283 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 RAB38P57729 211 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 ACY1Q03154 408 aa13.78□□□□□ -0.2
PTPRU-205ENST00000460170 GLO1Q04760 184 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms