RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 CDHR4A6H8M9 788 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 CLCA1A8K7I4 914 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 BBIP1A8MTZ0 92 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 EVPLLA8MZ36 301 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 FAM47E-STBD1D6RA91 191 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 H0Y3Z8 333 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 H3BML4 177 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 ADAMDEC1O15204 470 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 CCDC22O60826 627 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 PGM3O95394 542 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 NPPAP01160 153 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 THBS1P07996 1170 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 UBTFL6P0CB48 400 aaPredicted RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 IL11P20809 199 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 ELK4P28324 431 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 EEF1A1P68104 462 aaKnown RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 SRYQ05066 204 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 FOXF1Q12946 379 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 CBFBQ13951 182 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 NFYCQ13952 458 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 SELPLGQ14242 412 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 QPRTQ15274 297 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 MAPRE2Q15555 327 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 TRMT5Q32P41 509 aaKnown RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 RPS26P11Q5JNZ5 115 aaPredicted RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 GCNT6Q5T4J0 391 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 NET1Q7Z628 596 aaPredicted RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 GRAMD2AQ8IUY3 354 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 CCDC71Q8IV32 467 aaPredicted RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 LIX1LQ8IVB5 337 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 TNIP2Q8NFZ5 429 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 OR52P1PQ8NH57 321 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 FBXO27Q8NI29 283 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 WDR60Q8WVS4 1066 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 ST8SIA1Q92185 356 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 CNOT9Q92600 299 aaKnown RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 WNT2BQ93097 391 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 CCDC106Q9BWC9 280 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 MYLK2Q9H1R3 596 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 KAT8Q9H7Z6 458 aaKnown RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 ARMCX1Q9P291 453 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.03□□□□□ -0.32
IMP4-207ENST00000460100 CAPN7Q9Y6W3 813 aa13.03□□□□□ -0.32
IMP4-207ENST00000460100 LOC100653049A0A140TA62 436 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 HSPB2A8KAH6 182 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 FAAHO00519 579 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 KRT34O76011 436 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 ETS2P15036 469 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 IL7RP16871 459 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 GZMMP51124 257 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 EEFSECP57772 596 aaKnown RBP13.02□□□□□ -0.33
IMP4-207ENST00000460100 GNGT1P63211 74 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 HSPB2Q16082 182 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 ZSWIM7Q19AV6 140 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 MRPL2Q5T653 305 aaKnown RBP13.02□□□□□ -0.33
IMP4-207ENST00000460100 RNF220Q5VTB9 566 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 NANOGP8Q6NSW7 305 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 ZNF836Q6ZNA1 936 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 PIGWQ7Z7B1 504 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 SNX32Q86XE0 403 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 VRK2Q86Y07 508 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 PTOV1Q86YD1 416 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 PEX5LQ8IYB4 626 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 MEIOBQ8N635 442 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 C9orf106Q8NAJ2 232 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 ACBD4Q8NC06 268 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 RP9Q8TA86 221 aaKnown RBP13.02□□□□□ -0.33
IMP4-207ENST00000460100 BBS10Q8TAM1 723 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 LRRC58Q96CX6 371 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 TRIM8Q9BZR9 551 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 NANOGQ9H9S0 305 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 ACER3Q9NUN7 267 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 CENPEQ02224 2701 aa13.02□□□□□ -0.33
IMP4-207ENST00000460100 HCFC1P51610 2035 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 TMEM247A6NEH6 219 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 RCBTB2O95199 551 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 NUDT14O95848 222 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 TGM6O95932 706 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 PABPC4LP0CB38 370 aaKnown RBP13.01□□□□□ -0.33
IMP4-207ENST00000460100 PGCP20142 388 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 SLC6A8P48029 635 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 ZNF136P52737 540 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 SESN3P58005 492 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 MTPNP58546 118 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 CDK6Q00534 326 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 TFF3Q07654 80 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 RBBP4Q09028 425 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 CYLC2Q14093 348 aaPredicted RBP13.01□□□□□ -0.33
IMP4-207ENST00000460100 CAPRIN1Q14444 709 aaKnown RBP13.01□□□□□ -0.33
IMP4-207ENST00000460100 LIN52Q52LA3 116 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 REP15Q6BDI9 236 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 REEP3Q6NUK4 255 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 ESPNLQ6ZVH7 1005 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 SERPINA11Q86U17 422 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 MTDHQ86UE4 582 aaKnown RBP13.01□□□□□ -0.33
IMP4-207ENST00000460100 TREML1Q86YW5 311 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 UBQLNLQ8IYU4 475 aa13.01□□□□□ -0.33
IMP4-207ENST00000460100 CLIP4Q8N3C7 705 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms