RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SEMA7AO75326 666 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 ACTL6AO96019 429 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 TPOP07202 933 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 THBS1P07996 1170 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 UBTFL6P0CB48 400 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 CPN1P15169 458 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 TCEA1P23193 301 aaKnown RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 CHMP24386 653 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 PSMA4P25789 261 aaKnown RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 STARP49675 285 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 LHX2P50458 406 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 SUMO3P55854 103 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 PCBP3P57721 371 aaKnown RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 EEF1A1P68104 462 aaKnown RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 ART3Q13508 389 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 KRT72Q14CN4 511 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 PLPPR5Q32ZL2 321 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 DCST1Q5T197 706 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 MRPL2Q5T653 305 aaKnown RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 C1QL3Q5VWW1 255 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 CD163Q86VB7 1156 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 IFNEQ86WN2 208 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 GRAMD2AQ8IUY3 354 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 LURAP1LQ8IV03 231 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 CLIP4Q8N3C7 705 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 GTPBP8Q8N3Z3 284 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 C11orf65Q8NCR3 313 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 HIPK4Q8NE63 616 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 TOR1AIP2Q8NFQ8 470 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 OR5M9Q8NGP3 310 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 OR5M1Q8NGP8 315 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 WDR60Q8WVS4 1066 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 WDYHV1Q96HA8 205 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 ECSITQ9BQ95 431 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 PRDM14Q9GZV8 571 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 PIF1Q9H611 641 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 EXOSC3Q9NQT5 275 aaKnown RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 DNAJB12Q9NXW2 375 aaKnown RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 TAGLN3Q9UI15 199 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 ERRFI1Q9UJM3 462 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF232Q9UNY5 417 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 USP22Q9UPT9 525 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 VDAC3Q9Y277 283 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 IFT52Q9Y366 437 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 A0A1B0GUH1 482 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 C7orf72A4D263 438 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 CDHR4A6H8M9 788 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 WIPF3A6NGB9 483 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 CCT8L1PA6NM43 557 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 AHRRA9YTQ3 701 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 SHISA8B8ZZ34 492 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 LINC01387J3KSC0 135 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 M0QX08 132 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 NDUFAB1O14561 156 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 TPST1O60507 370 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 CYP7B1O75881 506 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 MFN2O95140 757 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 NTN1O95631 604 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 PABPC4LP0CB38 370 aaKnown RBP9.08□□□□□ -0.96
ATG4A-206ENST00000457035 ADH6P28332 368 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 ACAA2P42765 397 aaKnown RBP9.08□□□□□ -0.96
ATG4A-206ENST00000457035 CPA2P48052 419 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 ZNF41P51814 821 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-206ENST00000457035 DLX5P56178 289 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 CLDN15P56746 228 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 CLDN18P56856 261 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 CBFBQ13951 182 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 LARS2Q15031 903 aaKnown RBP9.08□□□□□ -0.96
ATG4A-206ENST00000457035 BCL2A1Q16548 175 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 CYP51A1Q16850 503 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 VMACQ2NL98 169 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 LIN52Q52LA3 116 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 SLC25A53Q5H9E4 307 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 ZNF311Q5JNZ3 666 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 WLSQ5T9L3 541 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 RNF220Q5VTB9 566 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 RTL6Q6ICC9 239 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 AAGABQ6PD74 315 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 ZNF836Q6ZNA1 936 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 FBXO27Q8NI29 283 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 HPS1Q92902 700 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 ZBTB8AQ96BR9 441 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 REXO5Q96IC2 774 aaKnown RBP9.08□□□□□ -0.96
ATG4A-206ENST00000457035 SFXN2Q96NB2 322 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 DMRTA2Q96SC8 542 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 PIGQQ9BRB3 760 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 SPATA9Q9BWV2 254 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 GMPR2Q9P2T1 348 aaKnown RBP9.08□□□□□ -0.96
ATG4A-206ENST00000457035 ZNF443Q9Y2A4 671 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-206ENST00000457035 MEMO1Q9Y316 297 aa9.08□□□□□ -0.96
ATG4A-206ENST00000457035 A1L4Q6 167 aa9.07□□□□□ -0.96
ATG4A-206ENST00000457035 E9PLN8 166 aa9.07□□□□□ -0.96
ATG4A-206ENST00000457035 CCL21O00585 134 aa9.07□□□□□ -0.96
ATG4A-206ENST00000457035 NME4O00746 187 aa9.07□□□□□ -0.96
ATG4A-206ENST00000457035 WDR1O75083 606 aa9.07□□□□□ -0.96
ATG4A-206ENST00000457035 NUDT14O95848 222 aa9.07□□□□□ -0.96
ATG4A-206ENST00000457035 EPPINO95925 133 aa9.07□□□□□ -0.96
ATG4A-206ENST00000457035 HOXD4P09016 255 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-206ENST00000457035 T-ENOLP0DO92 83 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms