RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CPA2P48052 419 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 FOXF1Q12946 379 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 FADDQ13158 208 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 SKP2Q13309 424 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 QPRTQ15274 297 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 ZSWIM7Q19AV6 140 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 COX20Q5RI15 118 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 SLC2A7Q6PXP3 512 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 ANKFN1Q8N957 763 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 RELL2Q8NC24 303 aaPredicted RBP20.85■□□□□ 0.93
CBX3-204ENST00000456948 OR2V1Q8NHB1 315 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 ZNF563Q8TA94 476 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 KLHL15Q96M94 604 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 TREX2Q9BQ50 279 aaPredicted RBP20.85■□□□□ 0.93
CBX3-204ENST00000456948 KCNE5Q9UJ90 142 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 ZNF232Q9UNY5 417 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 CORO2BQ9UQ03 480 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 PCDHB14Q9Y5E9 798 aa20.85■□□□□ 0.93
CBX3-204ENST00000456948 H0YC42 278 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 PLGP00747 810 aaPredicted RBP20.84■□□□□ 0.93
CBX3-204ENST00000456948 VIMP08670 466 aaKnown RBP20.84■□□□□ 0.93
CBX3-204ENST00000456948 PRKCAP17252 672 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 AGFG1P52594 562 aaKnown RBP20.84■□□□□ 0.93
CBX3-204ENST00000456948 TPD52P55327 224 aaPredicted RBP20.84■□□□□ 0.93
CBX3-204ENST00000456948 CARD18P57730 90 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 MYBPHQ13203 477 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 NDUFAF6Q330K2 333 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 HBMQ6B0K9 141 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 GGNQ86UU5 652 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 GCNT2Q8N0V5 402 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 CNEP1R1Q8N9A8 125 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 OR10D3Q8NH80 312 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 POC1BQ8TC44 478 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 ZNF559Q9BR84 538 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 TMEM185BQ9H7F4 350 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 EXOSC3Q9NQT5 275 aaKnown RBP20.84■□□□□ 0.93
CBX3-204ENST00000456948 GLRX2Q9NS18 164 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 PRDM4Q9UKN5 801 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 PACSIN3Q9UKS6 424 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 SPIN1Q9Y657 262 aaPredicted RBP20.84■□□□□ 0.93
CBX3-204ENST00000456948 MED12LQ86YW9 2145 aa20.84■□□□□ 0.93
CBX3-204ENST00000456948 A0A1W2PP18 115 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 AGAP5A6NIR3 686 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 EVPLLA8MZ36 301 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 OIP5O43482 229 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 ETFAP13804 333 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 FKBP2P26885 142 aaKnown RBP20.83■□□□□ 0.93
CBX3-204ENST00000456948 SLC7A1P30825 629 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 PGM1P36871 562 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 FUT5Q11128 374 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 FOXF2Q12947 444 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 SELENBP1Q13228 472 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 MAPK14Q16539 360 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 SLC25A53Q5H9E4 307 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 OLIG3Q7RTU3 272 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 FUNDC1Q8IVP5 155 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 FNDC9Q8TBE3 224 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 WDR60Q8WVS4 1066 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 FIG4Q92562 907 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 ZNF845Q96IR2 970 aaPredicted RBP20.83■□□□□ 0.93
CBX3-204ENST00000456948 TRIM8Q9BZR9 551 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 PAIP1Q9H074 479 aaKnown RBP20.83■□□□□ 0.93
CBX3-204ENST00000456948 SLC38A1Q9H2H9 487 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 RNF122Q9H9V4 155 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 SLC6A13Q9NSD5 602 aa20.83■□□□□ 0.93
CBX3-204ENST00000456948 A0A0G2JPF8 293 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 A0A1W2PNV4 684 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 HNRNPCL2B2RXH8 293 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 HNRNPCL3B7ZW38 293 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 C5orf58C9J3I9 102 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 TNFSF11O14788 317 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 ANGPT2O15123 496 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 HNRNPCL1O60812 293 aaKnown RBP20.82■□□□□ 0.92
CBX3-204ENST00000456948 CHRM4P08173 479 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 HNRNPCL4P0DMR1 293 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 SFTPDP35247 375 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 KIR2DL3P43628 341 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 LARS2Q15031 903 aaKnown RBP20.82■□□□□ 0.92
CBX3-204ENST00000456948 RGNQ15493 299 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 LRIF1Q5T3J3 769 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 POMZP3Q6PJE2 187 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 ZNF440Q8IYI8 595 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 TSPEARQ8WU66 669 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 OSTF1Q92882 214 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 CPNE4Q96A23 557 aaPredicted RBP20.82■□□□□ 0.92
CBX3-204ENST00000456948 ZG16BQ96DA0 208 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 RBM24Q9BX46 236 aaKnown RBP20.82■□□□□ 0.92
CBX3-204ENST00000456948 ACER3Q9NUN7 267 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 LEF1Q9UJU2 399 aaPredicted RBP20.82■□□□□ 0.92
CBX3-204ENST00000456948 NDUFAF1Q9Y375 327 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 EMC9Q9Y3B6 208 aa20.82■□□□□ 0.92
CBX3-204ENST00000456948 ADGRG4Q8IZF6 3080 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 PRAMEF27A3QJZ7 478 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 MSTNO14793 375 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 DNAJA2O60884 412 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 OPN1LWP04000 364 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 APOBEC1P41238 236 aaKnown RBP20.81■□□□□ 0.92
CBX3-204ENST00000456948 HTR3AP46098 478 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 CTBP2P56545 445 aa20.81■□□□□ 0.92
CBX3-204ENST00000456948 SESN3P58005 492 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms