RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 RACGAP1Q9H0H5 632 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 GAREM1Q9H706 876 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 MKKSQ9NPJ1 570 aaPredicted RBP12.59□□□□□ -0.39
CLK3-203ENST00000454830 HINT3Q9NQE9 182 aaKnown RBP12.59□□□□□ -0.39
CLK3-203ENST00000454830 POLE3Q9NRF9 147 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 SSR3Q9UNL2 185 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 C2orf92A0A1B0GVN3 265 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 RIIAD1A6NNX1 92 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 RPS4Y1P22090 263 aaKnown RBP12.59□□□□□ -0.39
CLK3-203ENST00000454830 PSMD4P55036 377 aaKnown RBP12.59□□□□□ -0.39
CLK3-203ENST00000454830 ZNF404Q494X3 552 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 TMEM201Q5SNT2 666 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 BTLAQ7Z6A9 289 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 OR10H4Q8NGA5 316 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 SLC2A12Q8TD20 617 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 OPALINQ96PE5 141 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 SNTG1Q9NSN8 517 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 RHBDL2Q9NX52 303 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 TNFRSF10DQ9UBN6 386 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 TMEM5Q9Y2B1 443 aa12.59□□□□□ -0.39
CLK3-203ENST00000454830 ELOA3DA6NLF2 546 aaPredicted RBP12.58□□□□□ -0.39
CLK3-203ENST00000454830 SURF4O15260 269 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 SOX30O94993 753 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 ACVR2AP27037 513 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 EMP3P54852 163 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 IRF3Q14653 427 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 ELOA3BQ3SY89 546 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 ELOA3Q8NG57 546 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 OR6C1Q96RD1 312 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 MARCH7Q9H992 704 aa12.58□□□□□ -0.39
CLK3-203ENST00000454830 PRR23D1E9PI22 279 aaPredicted RBP12.58□□□□□ -0.4
CLK3-203ENST00000454830 SIGLEC6O43699 453 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 CHP2O43745 196 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 HCN1O60741 890 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 HBQ1P09105 142 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 PRR23D2P0DMB1 279 aaPredicted RBP12.58□□□□□ -0.4
CLK3-203ENST00000454830 SLC15A1P46059 708 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 HLA-BQ31612 363 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 ZNF613Q6PF04 617 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 ZNF527Q8NB42 609 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 PROKR2Q8NFJ6 384 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 OR51L1Q8NGJ5 315 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 PTPMT1Q8WUK0 201 aaPredicted RBP12.58□□□□□ -0.4
CLK3-203ENST00000454830 A0A1B0GX78 115 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 RFPL3O75679 317 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 DRD5P21918 477 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 IDUAP35475 653 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 FUT7Q11130 342 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 LANCL3Q6ZV70 420 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 DAZLQ92904 295 aaKnown RBP12.58□□□□□ -0.4
CLK3-203ENST00000454830 ERMAPQ96PL5 475 aaPredicted RBP12.58□□□□□ -0.4
CLK3-203ENST00000454830 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.4
CLK3-203ENST00000454830 DIMT1Q9UNQ2 313 aaKnown RBP12.58□□□□□ -0.4
CLK3-203ENST00000454830 CEP192Q8TEP8 1941 aa12.58□□□□□ -0.4
CLK3-203ENST00000454830 LRRTM2O43300 516 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 HCRTR2O43614 444 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 MAP3K8P41279 467 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 RHAGQ02094 409 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 RAB40BQ12829 278 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 MADCAM1Q13477 382 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 SSX1Q16384 188 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 CRTC2Q53ET0 693 aaPredicted RBP12.57□□□□□ -0.4
CLK3-203ENST00000454830 ULK3Q6PHR2 472 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 HEATR5AQ86XA9 2040 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 RNF113BQ8IZP6 322 aaKnown RBP12.57□□□□□ -0.4
CLK3-203ENST00000454830 NANOGP1Q8N7R0 232 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 EDAQ92838 391 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 TP53INP1Q96A56 240 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 ASPNQ9BXN1 380 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 ABCB10Q9NRK6 738 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 LANCL2Q9NS86 450 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 A0A0B4J2E0 115 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 A0A1B0GX12 115 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 PATE3B3GLJ2 98 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 BLOC1S5-TXNDC5H3BN57 136 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 SCO2O43819 266 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 GPX5O75715 221 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 EPHA8P29322 1005 aaPredicted RBP12.57□□□□□ -0.4
CLK3-203ENST00000454830 PSMD7P51665 324 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 TUBA1BP68363 451 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLK3-203ENST00000454830 DSG2Q14126 1118 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 NR0B2Q15466 257 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 TUBA1AQ71U36 451 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 SLC29A4Q7RTT9 530 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 D2HGDHQ8N465 521 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 OR4K13Q8NH42 304 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 PMEPA1Q969W9 287 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 ZNF285Q96NJ3 590 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 WDR12Q9GZL7 423 aaKnown RBP12.57□□□□□ -0.4
CLK3-203ENST00000454830 UBQLN4Q9NRR5 601 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 SUSD2Q9UGT4 822 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 DAPK2Q9UIK4 370 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 YARS2Q9Y2Z4 477 aaKnown RBP12.57□□□□□ -0.4
CLK3-203ENST00000454830 MMACHCQ9Y4U1 282 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 CLDN16Q9Y5I7 305 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 IRGMA1A4Y4 181 aa12.57□□□□□ -0.4
CLK3-203ENST00000454830 SCG5P05408 212 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms