RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 QPRTQ15274 297 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 HSPB2Q16082 182 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 TRMT5Q32P41 509 aaKnown RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 RPS26P11Q5JNZ5 115 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 GCNT6Q5T4J0 391 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 NET1Q7Z628 596 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 TMCO5AQ8N6Q1 288 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 RELL2Q8NC24 303 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-205ENST00000454542 WNT2BQ93097 391 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 ZFP3Q96NJ6 502 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 TRIB1Q96RU8 372 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF175Q9Y473 711 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 ADGRG4Q8IZF6 3080 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 HCFC1P51610 2035 aa12.76□□□□□ -0.37
HDAC4-205ENST00000454542 A0A0G2JPF8 293 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 HNRNPCL2B2RXH8 293 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 HNRNPCL3B7ZW38 293 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 PRSS44E7EML9 344 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 ADAMDEC1O15204 470 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 EFNA2O43921 213 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 HNRNPCL1O60812 293 aaKnown RBP12.75□□□□□ -0.37
HDAC4-205ENST00000454542 IL18BPO95998 194 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 HNRNPCL4P0DMR1 293 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 IGFBP2P18065 325 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 IL11P20809 199 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 DRD4P21917 467 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 HTR1EP28566 365 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 CCR4P51679 360 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 EEFSECP57772 596 aaKnown RBP12.75□□□□□ -0.37
HDAC4-205ENST00000454542 EEF1A1P68104 462 aaKnown RBP12.75□□□□□ -0.37
HDAC4-205ENST00000454542 SRYQ05066 204 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 SF3A3Q12874 501 aaKnown RBP eCLIP12.75□□□□□ -0.37
HDAC4-205ENST00000454542 SELENBP1Q13228 472 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 SELPLGQ14242 412 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 MAPRE2Q15555 327 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 ADRM1Q16186 407 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 SLC25A35Q3KQZ1 300 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 LIN52Q52LA3 116 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 MRPL2Q5T653 305 aaKnown RBP12.75□□□□□ -0.37
HDAC4-205ENST00000454542 HIST2H2BCQ6DN03 193 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF836Q6ZNA1 936 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 SPATA21Q7Z572 469 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 GRAMD2AQ8IUY3 354 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 LIX1LQ8IVB5 337 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 BBS10Q8TAM1 723 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 CA5BP1Q8WTZ4 195 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 CNOT9Q92600 299 aaKnown RBP12.75□□□□□ -0.37
HDAC4-205ENST00000454542 MAL2Q969L2 176 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 COQ10BQ9H8M1 238 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.75□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF443Q9Y2A4 671 aaPredicted RBP12.75□□□□□ -0.37
HDAC4-205ENST00000454542 CHST2Q9Y4C5 530 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 CAPN7Q9Y6W3 813 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 UNC79Q9P2D8 2635 aa12.75□□□□□ -0.37
HDAC4-205ENST00000454542 CDHR4A6H8M9 788 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 TMEM247A6NEH6 219 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 C19orf84I3L1E1 186 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 SEC14L5O43304 696 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 RCBTB2O95199 551 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 TGM6O95932 706 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 PGCP20142 388 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 SHC1P29353 583 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 SLC6A8P48029 635 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 SEC24CP53992 1094 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 NFYCQ13952 458 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 GUSBP1Q15486 140 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 ZSWIM7Q19AV6 140 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 FBXL19-AS1Q494R0 122 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 REP15Q6BDI9 236 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 ESPNLQ6ZVH7 1005 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 PTOV1Q86YD1 416 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 PEX5LQ8IYB4 626 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 UBQLNLQ8IYU4 475 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 OR52P1PQ8NH57 321 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 FBXO27Q8NI29 283 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 KLHL15Q96M94 604 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 TM9SF2Q99805 663 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 THUMPD3Q9BV44 507 aaKnown RBP12.74□□□□□ -0.37
HDAC4-205ENST00000454542 KAT8Q9H7Z6 458 aaKnown RBP12.74□□□□□ -0.37
HDAC4-205ENST00000454542 NPDC1Q9NQX5 325 aaPredicted RBP12.74□□□□□ -0.37
HDAC4-205ENST00000454542 ACER3Q9NUN7 267 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 ZNF629Q9UEG4 869 aaPredicted RBP12.74□□□□□ -0.37
HDAC4-205ENST00000454542 MED12LQ86YW9 2145 aa12.74□□□□□ -0.37
HDAC4-205ENST00000454542 INTS1Q8N201 2190 aaKnown RBP12.73□□□□□ -0.37
HDAC4-205ENST00000454542 A0A0J9YW62 118 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 FAM90A27PA6NNH2 459 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 EVPLLA8MZ36 301 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 SNX3O60493 162 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 PGM3O95394 542 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 NUDT14O95848 222 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 IL2RAP01589 272 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 PABPC4LP0CB38 370 aaKnown RBP12.73□□□□□ -0.37
HDAC4-205ENST00000454542 ETS2P15036 469 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 COL8A1P27658 744 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 PCBP3P57721 371 aaKnown RBP12.73□□□□□ -0.37
HDAC4-205ENST00000454542 SESN3P58005 492 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 MTPNP58546 118 aa12.73□□□□□ -0.37
HDAC4-205ENST00000454542 RPS3AP61247 264 aaKnown RBP12.73□□□□□ -0.37
HDAC4-205ENST00000454542 CDK6Q00534 326 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms