RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MGAT2Q10469 447 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 TSTQ16762 297 aaKnown RBP14.66□□□□□ -0.06
SNX17-204ENST00000453453 ZNF630Q2M218 657 aaPredicted RBP14.66□□□□□ -0.06
SNX17-204ENST00000453453 TBRG1Q3YBR2 411 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 TRMT12Q53H54 448 aaKnown RBP14.66□□□□□ -0.06
SNX17-204ENST00000453453 FHL5Q5TD97 284 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 MRPL14Q6P1L8 145 aaKnown RBP14.66□□□□□ -0.06
SNX17-204ENST00000453453 SHISA6Q6ZSJ9 500 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 PLCZ1Q86YW0 608 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 TMEM151BQ8IW70 566 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 HORMAD2Q8N7B1 307 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ADAMTS14Q8WXS8 1223 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 CTHRC1Q96CG8 243 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 CRB3Q9BUF7 120 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 CNPPD1Q9BV87 410 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 SRRQ9GZT4 340 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 OR51I1Q9H343 314 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 NIPAL2Q9H841 368 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 GPR83Q9NYM4 423 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 C19orf25Q9UFG5 118 aaPredicted RBP14.66□□□□□ -0.06
SNX17-204ENST00000453453 KLHL21Q9UJP4 597 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ANGPT4Q9Y264 503 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 CARD8Q9Y2G2 431 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 GVINP1Q7Z2Y8 2422 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 PMS2P1A4D2B8 440 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 DUXAA6NLW8 204 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 C9orf172C9J069 976 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 C5orf58C9J3I9 102 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ZNF670-ZNF695F2Z2N8 137 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 NDUFB5O43674 189 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 PRAMEF2O60811 474 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ALOX12BO75342 701 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 TNFSF15O95150 251 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 RECKO95980 971 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 CT62P0C5K7 136 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 PGDP52209 483 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 HMGA2P52926 109 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 PSPHP78330 225 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 RUNX1T1Q06455 604 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 GNA13Q14344 377 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 NCF4Q15080 339 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ZNHIT3Q15649 155 aaPredicted RBP14.66□□□□□ -0.06
SNX17-204ENST00000453453 TMEM201Q5SNT2 666 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 LCN10Q6JVE6 187 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 MFSD12Q6NUT3 480 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ZCCHC12Q6PEW1 402 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 FAM198BQ6UWH4 519 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 LAPTM4BQ86VI4 370 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 LGI4Q8N135 537 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 SLC5A8Q8N695 610 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 B3GNT7Q8NFL0 401 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 OR14A16Q8NHC5 309 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ADAMTS15Q8TE58 950 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 DAZLQ92904 295 aaKnown RBP14.66□□□□□ -0.06
SNX17-204ENST00000453453 ACOXLQ9NUZ1 547 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 NDUFAF4Q9P032 175 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 P2RX2Q9UBL9 471 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ZAR1LA6NP61 321 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 BRINP1O60477 761 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 SOX30O94993 753 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 CCNB2O95067 398 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 IFNA14P01570 189 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 NUDT7P0C024 238 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 ARAFP10398 606 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 SNRPGP62308 76 aaKnown RBP14.65□□□□□ -0.06
SNX17-204ENST00000453453 CDK6Q00534 326 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 ZNF155Q12901 538 aaPredicted RBP14.65□□□□□ -0.06
SNX17-204ENST00000453453 SCARB2Q14108 478 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 EXOSC7Q15024 291 aaKnown RBP14.65□□□□□ -0.06
SNX17-204ENST00000453453 GPAT3Q53EU6 434 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 FAAH2Q6GMR7 532 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 CDC73Q6P1J9 531 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 FAM199XQ6PEV8 388 aaPredicted RBP14.65□□□□□ -0.06
SNX17-204ENST00000453453 DGAT2L6Q6ZPD8 337 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 ESX1Q8N693 406 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 CLDN22Q8N7P3 220 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 CDRT4Q8N9R6 151 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 DOK4Q8TEW6 326 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 ASB15Q8WXK1 588 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 TPD52L3Q96J77 140 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 SPSB2Q99619 263 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 YIPF4Q9BSR8 244 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 ASPNQ9BXN1 380 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 ANKRA2Q9H9E1 313 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 A4GALTQ9NPC4 353 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 ERVK-19Q9WJR5 959 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 CMAHPQ9Y471 501 aa14.65□□□□□ -0.06
SNX17-204ENST00000453453 CCDC88CQ9P219 2028 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 TEX51A0A1B0GUA7 166 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 A0A1W2PNU3 283 aaPredicted RBP14.64□□□□□ -0.07
SNX17-204ENST00000453453 CCDC182A6NF36 153 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 A8MUA0 341 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 HMGN4O00479 90 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 IL1AP01583 271 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 OR12D1P0DN82 309 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 CBLP22681 906 aa14.64□□□□□ -0.07
SNX17-204ENST00000453453 PTBP1P26599 531 aaKnown RBP eCLIP14.64□□□□□ -0.072e-8■□□□□ 8.3
SNX17-204ENST00000453453 RBMS1P29558 406 aaKnown RBP14.64□□□□□ -0.07
SNX17-204ENST00000453453 LIMS1P48059 325 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms