RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 KCNA7Q96RP8 456 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 GSTO2Q9H4Y5 243 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 REEP4Q9H6H4 257 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 ING1Q9UK53 422 aaPredicted RBP12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 POU2F3Q9UKI9 436 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 KCNS2Q9ULS6 477 aa12.62□□□□□ -0.39
LYSMD3-202ENST00000453259 IGKV3D-15A0A087WSY6 115 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 POC1B-GALNT4F8VUJ3 575 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 CRCPO75575 148 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 IGHV4-31P0DP07 118 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 PRKAG1P54619 331 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 CKAP4Q07065 602 aaKnown RBP12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 SQLEQ14534 574 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 KIAA0040Q15053 153 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 KLHL26Q53HC5 615 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 LIPNQ5VXI9 398 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 SLC22A25Q6T423 547 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 SZRD1Q7Z422 152 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 ZNF100Q8IYN0 542 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 PHOSPHO1Q8TCT1 267 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 FMO2Q99518 471 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 PIGUQ9H490 435 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 CXorf36Q9H7Y0 433 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 MYOZ1Q9NP98 299 aaPredicted RBP12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 NPAP1Q9NZP6 1156 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 TMED5Q9Y3A6 229 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 PMF1-BGLAPU3KQ54 211 aa12.61□□□□□ -0.39
LYSMD3-202ENST00000453259 EXOC1LA0A1B0GW35 172 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 E7EQL1 145 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 SLC28A1O00337 649 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 EFNA2O43921 213 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 EIF4E2O60573 245 aaKnown RBP12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 SEC22BO75396 215 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 UROSP10746 265 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 NEFHP12036 1026 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 IGHV1-2P23083 117 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 CD40P25942 277 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 FKBP2P26885 142 aaKnown RBP12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 CASQ1P31415 396 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 ASMTP46597 345 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 CSNK2A1P68400 391 aaPredicted RBP12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 LSM11P83369 360 aaKnown RBP eCLIP12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 FBXW9Q5XUX1 488 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 LRIG3Q6UXM1 1119 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 R3HCC1LQ7Z5L2 792 aaKnown RBP12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 ZAR1Q86SH2 424 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 ZNF525Q8N782 197 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 ZNF433Q8N7K0 673 aaPredicted RBP12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 GPR119Q8TDV5 335 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 SLC25A43Q8WUT9 341 aaPredicted RBP12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 ST8SIA1Q92185 356 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 FCRL1Q96LA6 429 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 INPP5KQ9BT40 448 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 FKRPQ9H9S5 495 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 C1orf109Q9NX04 203 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 TAS2R16Q9NYV7 291 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 MALT1Q9UDY8 824 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 PRSS50Q9UI38 385 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 CCL27Q9Y4X3 112 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 FKBP7Q9Y680 259 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 FREM1Q5H8C1 2179 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 PLCE1Q9P212 2302 aa12.6□□□□□ -0.39
LYSMD3-202ENST00000453259 GPR171O14626 319 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 SMAD9O15198 467 aaKnown RBP12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 DNPH1O43598 174 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 PGRP06401 933 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 ABHD2P08910 425 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 ZNF16P17020 682 aaPredicted RBP12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 RPL3P39023 403 aaKnown RBP12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 FABP6P51161 128 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 FOXA1P55317 472 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 SLC7A5Q01650 507 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 CBFBQ13951 182 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 FAM219BQ5XKK7 198 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 CBLN3Q6UW01 205 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 FRMD7Q6ZUT3 714 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 C17orf78Q8N4C9 275 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 NATD1Q8N6N6 113 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 OIT3Q8WWZ8 545 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 JADE3Q92613 823 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 CIDECQ96AQ7 238 aaPredicted RBP12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 EGLN2Q96KS0 407 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 SERINC1Q9NRX5 453 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 ZCCHC3Q9NUD5 404 aaKnown RBP12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 DCDC2Q9UHG0 476 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 SLC25A15Q9Y619 301 aa12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.59□□□□□ -0.39
LYSMD3-202ENST00000453259 GTPBP1O00178 669 aaKnown RBP12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 ZNF264O43296 627 aa12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 DNAJA2O60884 412 aa12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 HMGN2P05204 90 aaKnown RBP12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 PAX7P23759 505 aa12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 IGFBP5P24593 272 aa12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 ATP12AP54707 1039 aa12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 DNAJB13P59910 316 aa12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 ETF1P62495 437 aaKnown RBP12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 UBAP2Q5T6F2 1119 aaKnown RBP12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
LYSMD3-202ENST00000453259 CDC73Q6P1J9 531 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms