RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 C17orf51A8MQB3 221 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 AHRRA9YTQ3 701 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 STX11O75558 287 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 BCHEP06276 602 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 TFPTP0C1Z6 253 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 TCEA1P23193 301 aaKnown RBP15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 MSX1P28360 303 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 LCN1P31025 176 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 PCGF2P35227 344 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 GZMMP51124 257 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 TLE4Q04727 773 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 BNIP2Q12982 314 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 SNTA1Q13424 505 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 VEZF1Q14119 521 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 VMACQ2NL98 169 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 ACSF3Q4G176 576 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 RIPPLY2Q5TAB7 128 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 PRAMEF8Q5VWM4 474 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 PRAMEF7Q5VXH5 474 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 REEP3Q6NUK4 255 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 ZZZ3Q8IYH5 903 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 OR14L1PQ8NHC6 308 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 PMM1Q92871 262 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 ABTB1Q969K4 478 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 SDF2Q99470 211 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 MUC13Q9H3R2 512 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 CD300AQ9UGN4 299 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 LRRC42Q9Y546 428 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 KCNE3Q9Y6H6 103 aa15.46■□□□□ 0.07
PRPF40A-204ENST00000450303 A0A0G2JPF8 293 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 GXYLT2A0PJZ3 443 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 HNRNPCL2B2RXH8 293 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 HNRNPCL3B7ZW38 293 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 ABCB7O75027 752 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 CBR3O75828 277 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 KCNK2O95069 426 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 IL33O95760 270 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 EPPINO95925 133 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 GUSBP08236 651 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 NUDT7P0C024 238 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 HNRNPCL4P0DMR1 293 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 CYP4B1P13584 511 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 IGFBP2P18065 325 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 TCN1P20061 433 aaPredicted RBP15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 SSTR2P30874 369 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 RFX3P48380 749 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 PNLIPRP2P54317 469 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 SNTB1Q13884 538 aaKnown RBP15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 EFR3AQ14156 821 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 SYPL1Q16563 259 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 KRT73Q86Y46 540 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 PTOV1Q86YD1 416 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 RNF148Q8N7C7 305 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 NAXEQ8NCW5 288 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 NFKBIDQ8NI38 313 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 BBS10Q8TAM1 723 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 FAM110BQ8TC76 370 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 SLC38A5Q8WUX1 472 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 WDYHV1Q96HA8 205 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 TMEM19Q96HH6 336 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 TRIB1Q96RU8 372 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 ZNF607Q96SK3 696 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 TREX2Q9BQ50 279 aaPredicted RBP15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 PRDM14Q9GZV8 571 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 FBXL2Q9UKC9 423 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 PACSIN3Q9UKS6 424 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 WDR45Q9Y484 360 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 PDZD2O15018 2839 aa15.45■□□□□ 0.06
PRPF40A-204ENST00000450303 PCNX3Q9H6A9 2034 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 ENO4A6NNW6 628 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 SCO2O43819 266 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 ACADSP16219 412 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 STARP49675 285 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 SRYQ05066 204 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 CEACAM7Q14002 265 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 FLOT2Q14254 428 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 ADRM1Q16186 407 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 NHSL2Q5HYW2 709 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 FIGNL1Q6PIW4 674 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 PLCZ1Q86YW0 608 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 DMRTC2Q8IXT2 367 aaPredicted RBP15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 PM20D2Q8IYS1 436 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 C10orf111Q8N326 155 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 ANKFN1Q8N957 763 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 MAL2Q969L2 176 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 C14orf79Q96F83 325 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 SPATA5L1Q9BVQ7 753 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 HOXD1Q9GZZ0 328 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 BCL2L10Q9HD36 194 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 FLRT3Q9NZU0 649 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 MAGEL2Q9UJ55 1249 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 WIF1Q9Y5W5 379 aa15.44■□□□□ 0.06
PRPF40A-204ENST00000450303 HSPB2A8KAH6 182 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 B4DXG7 233 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 FAM47E-STBD1D6RA91 191 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 PGM3O95394 542 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 H6PDO95479 791 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 IFNA14P01570 189 aa15.43■□□□□ 0.06
PRPF40A-204ENST00000450303 AGFG1P52594 562 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms