RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CRHR1P34998 444 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 IDH3GP51553 393 aaPredicted RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 MANFP55145 182 aaKnown RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 NAA20P61599 178 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 RASGEF1BQ0VAM2 473 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 SH2D4BQ5SQS7 431 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 METTL2BQ6P1Q9 378 aaKnown RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 C1orf229Q6ZS94 237 aaPredicted RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF100Q8IYN0 542 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 STAG3L4Q8TBR4 150 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 NEU4Q8WWR8 484 aaPredicted RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 RNF145Q96MT1 663 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 NPAS1Q99742 590 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 MRPL57Q9BQC6 102 aaKnown RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 SRXN1Q9BYN0 137 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 TBL1XR1Q9BZK7 514 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 VPS11Q9H270 941 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 MRPL46Q9H2W6 279 aaKnown RBP10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 GRID1Q9ULK0 1009 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF780BQ9Y6R6 833 aa10.98□□□□□ -0.65
AC004540.1-204ENST00000449537 B9A039 149 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 C9JVG2 144 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 ATP6V1G2-DDX39BF2Z307 99 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 POLR3GO15318 223 aaPredicted RBP10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 GUCY1B2O75343 617 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 ANGPTL1O95841 491 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 S100BP04271 92 aaPredicted RBP10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 ERCC1P07992 297 aaPredicted RBP10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 SFTPDP35247 375 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 KHKP50053 298 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 RIN1Q13671 783 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 CYP27C1Q4G0S4 372 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 CCNYL2Q5T2Q4 361 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 SPATA19Q7Z5L4 167 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 HOMEZQ8IX15 550 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 CENPLQ8N0S6 344 aaPredicted RBP10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 PDPRQ8NCN5 879 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 WDR60Q8WVS4 1066 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF775Q96BV0 537 aaPredicted RBP10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 TLCD1Q96CP7 247 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 KLHL29Q96CT2 875 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 ERP27Q96DN0 273 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 CCDC126Q96EE4 140 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 MMP27Q9H306 513 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 BCO1Q9HAY6 547 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 NUDT4Q9NZJ9 180 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 KLHL9Q9P2J3 617 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 MCM8Q9UJA3 840 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 TRAF6Q9Y4K3 522 aa10.97□□□□□ -0.65
AC004540.1-204ENST00000449537 C7orf72A4D263 438 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 PNPP00491 289 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 AVPP01185 164 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 TAC1P20366 129 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 ENPP1P22413 925 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 FPR2P25090 351 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 EDNRAP25101 427 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 DECR1Q16698 335 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 TECRLQ5HYJ1 363 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 LIPJQ5W064 366 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 FAM180BQ6P0A1 224 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 RBMS3Q6XE24 437 aaKnown RBP10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 C1QL4Q86Z23 238 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 CCDC116Q8IYX3 515 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 UBE2J2Q8N2K1 259 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 OR51F2Q8NH61 342 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF675Q8TD23 568 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 UBASH3BQ8TF42 649 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 SLC9A6Q92581 669 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 ZNF681Q96N22 645 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 CCT8L2Q96SF2 557 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 SERPINI1Q99574 410 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 CXorf36Q9H7Y0 433 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 HHATLQ9HCP6 504 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 TAS2R9Q9NYW1 312 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 AHSPQ9NZD4 102 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 OPTCQ9UBM4 332 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 FBXO9Q9UK97 447 aaPredicted RBP10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 MOKQ9UQ07 419 aa10.96□□□□□ -0.65
AC004540.1-204ENST00000449537 TRAV20A0A0B4J274 112 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 A0A1W2PRB8 838 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 H0YIV9 168 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 K7EPI3 171 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 RGS14O43566 566 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 SEMA3DO95025 777 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 VSIG8P0DPA2 414 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 PRTN3P24158 256 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 SHC1P29353 583 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 PPOXP50336 477 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 ZNF41P51814 821 aaPredicted RBP10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 MAPK12P53778 367 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 PRKAA2P54646 552 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 CBX1P83916 185 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 PRR5P85299 388 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 GABPB1Q06547 395 aaPredicted RBP10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 OR4D1Q15615 310 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 CPSF6Q16630 551 aaKnown RBP eCLIP10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 TTMPQ5BVD1 217 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 ZNF628Q5EBL2 1059 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 FBXW9Q5XUX1 488 aa10.95□□□□□ -0.66
AC004540.1-204ENST00000449537 OR7E24Q6IFN5 339 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms