RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TNFRSF21O75509 655 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 PDE5AO76074 875 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 ATE1O95260 518 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 HOXB4P17483 251 aaPredicted RBP12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 PPIBP23284 216 aaKnown RBP12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 MSX2P35548 267 aaPredicted RBP12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 PTGDSP41222 190 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 PSPHP78330 225 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 LIPEQ05469 1076 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 PLCXD2Q0VAA5 305 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 CEACAM7Q14002 265 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 CYP51A1Q16850 503 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 RPS26P11Q5JNZ5 115 aaPredicted RBP12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 DCST1Q5T197 706 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 GCNT6Q5T4J0 391 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 AAGABQ6PD74 315 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 C16orf89Q6UX73 402 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 HMGN2P46Q86SG4 172 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 ADGRE4PQ86SQ3 457 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 CALHM3Q86XJ0 350 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 PTOV1Q86YD1 416 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 COX18Q8N8Q8 333 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 C9orf106Q8NAJ2 232 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 OR14L1PQ8NHC6 308 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 HOPXQ9BPY8 73 aaPredicted RBP12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 RBM24Q9BX46 236 aaKnown RBP12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 OR2B2Q9GZK3 357 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 PIGMQ9H3S5 423 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 PIGUQ9H490 435 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 DLL4Q9NR61 685 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 FLRT3Q9NZU0 649 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 TMEM181Q9P2C4 612 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 ABCD2Q9UBJ2 740 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 NDRG3Q9UGV2 375 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 RPH3AQ9Y2J0 694 aaPredicted RBP12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 OR10H1Q9Y4A9 318 aa12.43□□□□□ -0.42
PDLIM2-213ENST00000448520 ABCA2Q9BZC7 2435 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 NPIPA5A0A0B4J1W7 369 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 PRORSD1PA6NEY8 169 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 PRAMEF25A6NGN4 478 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 CLCA1A8K7I4 914 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 NPIPA7E9PJI5 369 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 CASKO14936 926 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 GYG2O15488 501 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 UGT2B11O75310 529 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 BCHEP06276 602 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 NPIPA8P0DM63 369 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 TCN1P20061 433 aaPredicted RBP12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 GSK3BP49841 420 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 MRPS22P82650 360 aaKnown RBP12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 ZNHIT3Q15649 155 aaPredicted RBP12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 ADRM1Q16186 407 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 SYPL1Q16563 259 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 ZCCHC12Q6PEW1 402 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 ARPINQ7Z6K5 226 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 PLCZ1Q86YW0 608 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 WDSUB1Q8N9V3 476 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 NFKBIDQ8NI38 313 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 TMBIM1Q969X1 311 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 EFHD2Q96C19 240 aaPredicted RBP12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 ZNF583Q96ND8 569 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 COL21A1Q96P44 957 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 STACQ99469 402 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 ECSITQ9BQ95 431 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 TUBA1CQ9BQE3 449 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 BTBD10Q9BSF8 475 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 THTPAQ9BU02 230 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 RAD21L1Q9H4I0 556 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 GIN1Q9NXP7 522 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 TAS2R10Q9NYW0 307 aa12.42□□□□□ -0.42
PDLIM2-213ENST00000448520 FLNAP21333 2647 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 C2orf72A6NCS6 295 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 H0Y3Z8 333 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 REM1O75628 298 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 KCNK2O95069 426 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 HRGP04196 525 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 CHRM4P08173 479 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 ARAFP10398 606 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 BMP2P12643 396 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 SRD5A2P31213 254 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 HOXC12P31275 282 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 PCYT1AP49585 367 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 RNF144AP50876 292 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 GFRA1P56159 465 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 EEFSECP57772 596 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 POU6F2P78424 691 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 SRYQ05066 204 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 FOXF2Q12947 444 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 FADDQ13158 208 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 EFR3AQ14156 821 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 BCL2A1Q16548 175 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 DCST2Q5T1A1 773 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 HEPHL1Q6MZM0 1159 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 C16orf62Q7Z3J2 963 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 NET1Q7Z628 596 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 BIVMQ86UB2 503 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 SLC38A5Q8WUX1 472 aa12.41□□□□□ -0.42
PDLIM2-213ENST00000448520 SMPDL3BQ92485 455 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms