RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ANXA11P50995 505 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 TXNL4AP83876 142 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 CBFBQ13951 182 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 QPRTQ15274 297 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 MAPK11Q15759 364 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC25A53Q5H9E4 307 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 C6orf10Q5SRN2 563 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 HBMQ6B0K9 141 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 VWA1Q6PCB0 445 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC2A7Q6PXP3 512 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 BLOC1S3Q6QNY0 202 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 ESPNLQ6ZVH7 1005 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 KIF18BQ86Y91 864 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 ZZZ3Q8IYH5 903 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 CNEP1R1Q8N9A8 125 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 OR2V1Q8NHB1 315 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 OIT3Q8WWZ8 545 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 GTF2H4Q92759 462 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 OSTF1Q92882 214 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 THOC1Q96FV9 657 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 AURKBQ96GD4 344 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 MRGPRX4Q96LA9 322 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 RBM24Q9BX46 236 aaKnown RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC38A1Q9H2H9 487 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 MTHFD2LQ9H903 347 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 TPT1P8Q9HAU6 139 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 PAQR5Q9NXK6 330 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 PCDHB14Q9Y5E9 798 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 NOTCH2Q04721 2471 aa11.43□□□□□ -0.58
PRPF40A-203ENST00000448428 APCP25054 2843 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 DCHS2Q6V1P9 2916 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 CLDN24A6NM45 220 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 ETV2O00321 342 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 MSTNO14793 375 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 SMNDC1O75940 238 aaKnown RBP eCLIP11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 NR2F1P10589 423 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 ETFAP13804 333 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 CD1EP15812 388 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 ELK4P28324 431 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 CRATP43155 626 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 MAGEA8P43361 318 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 CARD18P57730 90 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 SESN3P58005 492 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 STX1BP61266 288 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 SIRPAP78324 504 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 KCNJ10P78508 379 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 HPCAP84074 193 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 GUSBP1Q15486 140 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 TMEM176BQ3YBM2 270 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 PDSS1Q5T2R2 415 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 PPP4R4Q6NUP7 873 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 LRRC74BQ6ZQY2 392 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 FAM71CQ8NEG0 241 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 ATP6V1C2Q8NEY4 427 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 LINC01560Q8TB33 94 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 KLHL15Q96M94 604 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 PRRG4Q9BZD6 226 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 PAIP1Q9H074 479 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC52A3Q9NQ40 469 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 GALNT8Q9NY28 637 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 CCDC167Q9P0B6 97 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC35A3Q9Y2D2 325 aa11.42□□□□□ -0.58
PRPF40A-203ENST00000448428 TUBAL3A6NHL2 446 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 AGAP5A6NIR3 686 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 EDF1O60869 148 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 SYNGR4O95473 234 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 CGAP01215 116 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 TFPTP0C1Z6 253 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 FCGR2AP12318 317 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 NID1P14543 1247 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 HOXB9P17482 250 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 PGCP20142 388 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 CAPN3P20807 821 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 CPA2P48052 419 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 PLAURQ03405 335 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 FAM222BQ8WU58 562 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 SLC38A5Q8WUX1 472 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 ROBO4Q8WZ75 1007 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 ST8SIA1Q92185 356 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 CNOT9Q92600 299 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 SPDL1Q96EA4 605 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 OPN3Q9H1Y3 402 aaPredicted RBP11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 SLAMF8Q9P0V8 285 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 DCTN4Q9UJW0 460 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 MCTS1Q9ULC4 181 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 CLEC4AQ9UMR7 237 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 TEX15Q9BXT5 2789 aa11.41□□□□□ -0.58
PRPF40A-203ENST00000448428 A0A096LPI6 279 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 FAM221AA4D161 298 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 GJE1A6NN92 205 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 CLIC1O00299 241 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 NR5A2O00482 541 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 ADAM11O75078 769 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 CTAG2O75638 210 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 RPS4Y1P22090 263 aaKnown RBP11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 RYKP34925 604 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 ATP4BP51164 291 aa11.4□□□□□ -0.58
PRPF40A-203ENST00000448428 DSTNP60981 165 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms