RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PTP4A1Q93096 173 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 BPIFA2Q96DR5 249 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 KATNB1Q9BVA0 655 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 FBRSQ9HAH7 460 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 CACYBPQ9HB71 228 aaKnown RBP13.68□□□□□ -0.22
SF1-211ENST00000448404 SOHLH2Q9NX45 425 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 NTMQ9P121 344 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 PLEKHB1Q9UF11 243 aaPredicted RBP13.68□□□□□ -0.22
SF1-211ENST00000448404 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 SF3B6Q9Y3B4 125 aaKnown RBP13.68□□□□□ -0.22
SF1-211ENST00000448404 PEX16Q9Y5Y5 336 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 CDH10Q9Y6N8 788 aa13.68□□□□□ -0.22
SF1-211ENST00000448404 A0A1B0GWA3 101 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 TRAPPC13A5PLN9 417 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 CCDC85CA6NKD9 419 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 FAM171A2A8MVW0 826 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 KDM4EB2RXH2 506 aaPredicted RBP13.67□□□□□ -0.22
SF1-211ENST00000448404 PSMD9O00233 223 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 PLOD3O60568 738 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 OR5F1O95221 314 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 CSF2P04141 144 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 NAT1P18440 290 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 IFNGR2P38484 337 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 UBXN2BQ14CS0 331 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 CDRT4Q8N9R6 151 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 RIT1Q92963 219 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 NRSN2Q9GZP1 204 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 NEK6Q9HC98 313 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 ZNF223Q9UK11 482 aaPredicted RBP13.67□□□□□ -0.22
SF1-211ENST00000448404 POMT2Q9UKY4 750 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 ADAM18Q9Y3Q7 739 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 LRP4O75096 1905 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 ASCC3Q8N3C0 2202 aaKnown RBP13.67□□□□□ -0.22
SF1-211ENST00000448404 A0A1W2PPC4 97 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 BRINP1O60477 761 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 CPEP16870 476 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 ALAS2P22557 587 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 IFNA8P32881 189 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 BNC1Q01954 994 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 RAB40BQ12829 278 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 CRMP1Q14194 572 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 RANBP3LQ86VV4 465 aaPredicted RBP13.67□□□□□ -0.22
SF1-211ENST00000448404 ZNRF4Q8WWF5 429 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 OSTF1Q92882 214 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 RBM18Q96H35 190 aaKnown RBP13.67□□□□□ -0.22
SF1-211ENST00000448404 MMP28Q9H239 520 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 DHCR7Q9UBM7 475 aaKnown RBP13.67□□□□□ -0.22
SF1-211ENST00000448404 HS3ST3A1Q9Y663 406 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 MED12Q93074 2177 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 THADAQ6YHU6 1953 aa13.67□□□□□ -0.22
SF1-211ENST00000448404 WISP1O95388 367 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 RORCP51449 518 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 CRYZQ08257 329 aaKnown RBP13.66□□□□□ -0.22
SF1-211ENST00000448404 AMZ1Q400G9 498 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 PRAMEF8Q5VWM4 474 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 PRAMEF7Q5VXH5 474 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 SSX6Q7RTT6 188 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 NR2C2APQ86WQ0 139 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 SIX5Q8N196 739 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 ZNF655Q8N720 491 aaPredicted RBP13.66□□□□□ -0.22
SF1-211ENST00000448404 TSTD1Q8NFU3 115 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 CD180Q99467 661 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 TIMP4Q99727 224 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 FOLH1BQ9HBA9 442 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 LYRM4Q9HD34 91 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 CLDN16Q9Y5I7 305 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 SPACA6W5XKT8 324 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 A0A087WV48 116 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 OIP5O43482 229 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 SOX30O94993 753 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 CHRNB1P11230 501 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 ZNF10P21506 573 aaPredicted RBP13.66□□□□□ -0.22
SF1-211ENST00000448404 STAT5AP42229 794 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 CSNK1EP49674 416 aaKnown RBP13.66□□□□□ -0.22
SF1-211ENST00000448404 E2F1Q01094 437 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 PRKCDQ05655 676 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 KLHL22Q53GT1 634 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 KIRREL2Q6UWL6 708 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 FAM131AQ6UXB0 335 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 TMPRSS11AQ6ZMR5 421 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 SHISA6Q6ZSJ9 500 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 MARCH9Q86YJ5 346 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 ZNF485Q8NCK3 441 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 CTHRC1Q96CG8 243 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 ORAI1Q96D31 301 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 ARHGAP9Q9BRR9 750 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 C8orf33Q9H7E9 229 aaPredicted RBP13.66□□□□□ -0.22
SF1-211ENST00000448404 H2AFY2Q9P0M6 372 aaPredicted RBP13.66□□□□□ -0.22
SF1-211ENST00000448404 TNFRSF10DQ9UBN6 386 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 A0A1W2PQ09 198 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 CASKO14936 926 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 DBIP07108 87 aaKnown RBP13.66□□□□□ -0.22
SF1-211ENST00000448404 GRPRP30550 384 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 ACVR1BP36896 505 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 P2RY14Q15391 338 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 POMZP3Q6PJE2 187 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 MRGPREQ86SM8 312 aa13.66□□□□□ -0.22
SF1-211ENST00000448404 SLC37A3Q8NCC5 494 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms