RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 UQCRBP14927 111 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 ZNF17P17021 662 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 MSX2P35548 267 aaPredicted RBP12.72□□□□□ -0.37
CTSS-202ENST00000448301 DLX5P56178 289 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 SELENOWP63302 87 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 TMEM44Q2T9K0 475 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 WIPI1Q5MNZ9 446 aaPredicted RBP12.72□□□□□ -0.37
CTSS-202ENST00000448301 PGM2L1Q6PCE3 622 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 CBLL1Q75N03 491 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 YRDCQ86U90 279 aaKnown RBP12.72□□□□□ -0.37
CTSS-202ENST00000448301 OR52E4Q8NGH9 312 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 NEIL3Q8TAT5 605 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 ST8SIA1Q92185 356 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 CLPTM1LQ96KA5 538 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 ARHGDIGQ99819 225 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 CADM1Q9BY67 442 aaKnown RBP12.72□□□□□ -0.37
CTSS-202ENST00000448301 PCDHAC1Q9H158 963 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 SLC6A15Q9H2J7 730 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 LDAHQ9H6V9 325 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 ADPRHL2Q9NX46 363 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 CHD6Q8TD26 2715 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 ZNF407Q9C0G0 2248 aa12.72□□□□□ -0.37
CTSS-202ENST00000448301 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 TMEM229AB2RXF0 380 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 AQP7O14520 342 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 AP3D1O14617 1153 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 FRS3O43559 492 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 SERPINA1P01009 418 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 GKN3PP0CG01 181 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 PRKCAP17252 672 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 ADH6P28332 368 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 RYKP34925 604 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 EIF1P41567 113 aaKnown RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 ACAA2P42765 397 aaKnown RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 GFRA1P56159 465 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 RGS8P57771 180 aaPredicted RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 B3GALT5-AS1P59052 145 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 TLE1Q04724 770 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 TRIM25Q14258 630 aaKnown RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 QPRTQ15274 297 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 TOMM34Q15785 309 aaPredicted RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 NRF1Q16656 503 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 NHSL2Q5HYW2 709 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 RAET1LQ5VY80 246 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 ARHGAP11AQ6P4F7 1023 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 PRICKLE2Q7Z3G6 844 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 SPPL2CQ8IUH8 684 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 EID3Q8N140 333 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 GTPBP8Q8N3Z3 284 aaPredicted RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 ST6GALNAC3Q8NDV1 305 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 ZNF563Q8TA94 476 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 TMEM234Q8WY98 164 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 LZICQ8WZA0 190 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 MCUR1Q96AQ8 359 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 ASB9Q96DX5 294 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 MRGPRX4Q96LA9 322 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 NSMCE2Q96MF7 247 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 PIGQQ9BRB3 760 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 MMADHCQ9H3L0 296 aaPredicted RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 ACTR3BQ9P1U1 418 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 TESQ9UGI8 421 aaKnown RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 RPS6KA6Q9UK32 745 aa12.71□□□□□ -0.37
CTSS-202ENST00000448301 SAMD4AQ9UPU9 718 aaKnown RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 RPH3AQ9Y2J0 694 aaPredicted RBP12.71□□□□□ -0.37
CTSS-202ENST00000448301 LINC01387J3KSC0 135 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 NTN1O95631 604 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 PRG2P13727 222 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 CHMP24386 653 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 PSMA4P25789 261 aaKnown RBP12.71□□□□□ -0.38
CTSS-202ENST00000448301 GCKP35557 465 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 ZNF136P52737 540 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 HSF1Q00613 529 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 LCN8Q6JVE9 175 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 AAGABQ6PD74 315 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 ASRGL1Q7L266 308 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 YTHDF3Q7Z739 585 aaKnown RBP12.71□□□□□ -0.38
CTSS-202ENST00000448301 ULK2Q8IYT8 1036 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 POC1BQ8TC44 478 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 PROX1Q92786 737 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 MIB2Q96AX9 1013 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 ZNF524Q96C55 264 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 SFXN2Q96NB2 322 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 EXO5Q9H790 373 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 ACER3Q9NUN7 267 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 DCAF13Q9NV06 445 aaKnown RBP12.71□□□□□ -0.38
CTSS-202ENST00000448301 SLC9A8Q9Y2E8 581 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 DNAJC13O75165 2243 aa12.71□□□□□ -0.38
CTSS-202ENST00000448301 PRRC2CQ9Y520 2896 aaKnown RBP12.7□□□□□ -0.38
CTSS-202ENST00000448301 A0A1B0GTH9 108 aa12.7□□□□□ -0.38
CTSS-202ENST00000448301 OR2M5A3KFT3 312 aa12.7□□□□□ -0.38
CTSS-202ENST00000448301 OR14I1A6ND48 311 aa12.7□□□□□ -0.38
CTSS-202ENST00000448301 M0R3H8 397 aa12.7□□□□□ -0.38
CTSS-202ENST00000448301 ZNF682O95780 498 aa12.7□□□□□ -0.38
CTSS-202ENST00000448301 ACTL6AO96019 429 aa12.7□□□□□ -0.38
CTSS-202ENST00000448301 TCEA1P23193 301 aaKnown RBP12.7□□□□□ -0.38
CTSS-202ENST00000448301 ELK4P28324 431 aa12.7□□□□□ -0.38
CTSS-202ENST00000448301 IDH2P48735 452 aaKnown RBP12.7□□□□□ -0.38
CTSS-202ENST00000448301 SESN3P58005 492 aa12.7□□□□□ -0.38
CTSS-202ENST00000448301 COPZ1P61923 177 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms