RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PPP1R8Q12972 351 aaKnown RBP17.79■□□□□ 0.44
SGCE-207ENST00000447873 TRIP10Q15642 601 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 COLEC12Q5KU26 742 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 WBP2NLQ6ICG8 309 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 ZNF613Q6PF04 617 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 PLCZ1Q86YW0 608 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 WDSUB1Q8N9V3 476 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 MDS2Q8NDY4 140 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 PIK3C3Q8NEB9 887 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 NTNG2Q96CW9 530 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 SLC41A3Q96GZ6 507 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 TMEM41AQ96HV5 264 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 C5orf34Q96MH7 638 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 DSN1Q9H410 356 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 ACER3Q9NUN7 267 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 VNN3Q9NY84 501 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 STOML1Q9UBI4 398 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 PCDHGA9Q9Y5G4 932 aaKnown RBP17.79■□□□□ 0.44
SGCE-207ENST00000447873 PTPRQQ9UMZ3 2332 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 ANKUB1A6NFN9 424 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 FAAHO00519 579 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 SNPHO15079 494 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 ZNF23P17027 643 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 ARHGDIAP52565 204 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 IST1P53990 364 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 GPR85P60893 370 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 SNCBQ16143 134 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 SLC25A25Q6KCM7 469 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 GDF7Q7Z4P5 450 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 OR4K17Q8NGC6 315 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 OR1J4Q8NGS1 313 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 RNF217Q8TC41 542 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 GPR119Q8TDV5 335 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 TM9SF4Q92544 642 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 RASSF4Q9H2L5 321 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 PTGES2Q9H7Z7 377 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 KLHL1Q9NR64 748 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 SELENONQ9NZV5 590 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 SLC7A7Q9UM01 511 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 LYVE1Q9Y5Y7 322 aa17.79■□□□□ 0.44
SGCE-207ENST00000447873 A0A0G2JMM0 328 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 A0A1B0GWA3 101 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 A0A1W2PPB8 328 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 A0A1W2PRS3 328 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 SAC3D1A6NKF1 404 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 KIR3DP1A8MWS1 328 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 B4DXG7 233 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 TRIM3O75382 744 aaPredicted RBP17.78■□□□□ 0.44
SGCE-207ENST00000447873 SP1P08047 785 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 DNAJA1P31689 397 aaKnown RBP17.78■□□□□ 0.44
SGCE-207ENST00000447873 TNFSF10P50591 281 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 TRAM2Q15035 370 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 QPRTQ15274 297 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 TBR1Q16650 682 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 FGD3Q5JSP0 725 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 TIGD3Q6B0B8 471 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 ULK3Q6PHR2 472 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 CATSPER1Q8NEC5 780 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 OR2M3Q8NG83 312 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 SNRNP27Q8WVK2 155 aaKnown RBP17.78■□□□□ 0.44
SGCE-207ENST00000447873 DHRS1Q96LJ7 313 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 ZNF597Q96LX8 424 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 EPYCQ99645 322 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 KLHDC3Q9BQ90 382 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 HES7Q9BYE0 225 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 DEPPQ9NTK1 212 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 OAZ3Q9UMX2 235 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 KLF13Q9Y2Y9 288 aaPredicted RBP17.78■□□□□ 0.44
SGCE-207ENST00000447873 HRH3Q9Y5N1 445 aa17.78■□□□□ 0.44
SGCE-207ENST00000447873 MGAQ8IWI9 3026 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 A0A0B4J2E0 115 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 A0A1B0GX12 115 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 A0A1W2PRQ8 180 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 MKRN2OSH3BPM6 223 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 CDC40O60508 579 aaKnown RBP eCLIP17.77■□□□□ 0.44
SGCE-207ENST00000447873 THRBP10828 461 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 FUT4P22083 530 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 ELAVL4P26378 380 aaKnown RBP17.77■□□□□ 0.44
SGCE-207ENST00000447873 HMGA2P52926 109 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 KCNAB2Q13303 367 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 DGCR6Q14129 220 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 GK3PQ14409 553 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 TOMM34Q15785 309 aaPredicted RBP17.77■□□□□ 0.44
SGCE-207ENST00000447873 EXOC3L2Q2M3D2 409 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 ALG10BQ5I7T1 473 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 FADS6Q8N9I5 356 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 OR5K1Q8NHB7 308 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 DNAJA4Q8WW22 397 aaPredicted RBP17.77■□□□□ 0.44
SGCE-207ENST00000447873 TMEM234Q8WY98 164 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 EME1Q96AY2 570 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 SDCCAG3Q96C92 435 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 ALPK1Q96QP1 1244 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 FAM173AQ9BQD7 235 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 MAN2C1Q9NTJ4 1040 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 FBXL2Q9UKC9 423 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 PRDM4Q9UKN5 801 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 TMCC3Q9ULS5 477 aa17.77■□□□□ 0.44
SGCE-207ENST00000447873 TNRC6AQ8NDV7 1962 aaKnown RBP17.77■□□□□ 0.43
SGCE-207ENST00000447873 G3V2T6 193 aa17.76■□□□□ 0.43
SGCE-207ENST00000447873 CASQ2O14958 399 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms