RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 AQP5P55064 265 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 CBFBQ13951 182 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 FGFBP1Q14512 234 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 TMEM176BQ3YBM2 270 aaPredicted RBP13.23□□□□□ -0.29
USE1-202ENST00000445667 GTDC1Q4AE62 458 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 TIGD2Q4W5G0 525 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 AP1ARQ63HQ0 302 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 EIF3MQ7L2H7 374 aaKnown RBP13.23□□□□□ -0.29
USE1-202ENST00000445667 TOR1AIP2Q8NFQ8 470 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 ZFP90Q8TF47 636 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 FAM222BQ8WU58 562 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 KLHL15Q96M94 604 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 GPATCH1Q9BRR8 931 aaKnown RBP13.23□□□□□ -0.29
USE1-202ENST00000445667 POLE3Q9NRF9 147 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 ITGB1BP2Q9UKP3 347 aa13.23□□□□□ -0.29
USE1-202ENST00000445667 TACC2O95359 2948 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 CSMD1Q96PZ7 3565 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 FAM234BA2RU67 622 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 CLDN24A6NM45 220 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 ENO4A6NNW6 628 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 MSTNO14793 375 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 CTAG2O75638 210 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 SYNGR4O95473 234 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 NTN1O95631 604 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 KRT75O95678 551 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 CGAP01215 116 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 CHRM4P08173 479 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 GUSBP08236 651 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 EPXP11678 715 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 ELK4P28324 431 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 CPOXP36551 454 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 PGM1P36871 562 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 CARD18P57730 90 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 KCNJ10P78508 379 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 HPCAP84074 193 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 FAM27E3Q08E93 113 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 GUSBP1Q15486 140 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 PDSS1Q5T2R2 415 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 ZNF474Q6S9Z5 364 aaPredicted RBP13.22□□□□□ -0.29
USE1-202ENST00000445667 ZNF610Q8N9Z0 462 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 CKAP2Q8WWK9 683 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 ROBO4Q8WZ75 1007 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 NRGNQ92686 78 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 THOC1Q96FV9 657 aaKnown RBP13.22□□□□□ -0.29
USE1-202ENST00000445667 AURKBQ96GD4 344 aaPredicted RBP13.22□□□□□ -0.29
USE1-202ENST00000445667 ITCHQ96J02 903 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 MRGPRX4Q96LA9 322 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 TRNT1Q96Q11 434 aaKnown RBP13.22□□□□□ -0.29
USE1-202ENST00000445667 SLC38A1Q9H2H9 487 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 RMND5AQ9H871 391 aa13.22□□□□□ -0.29
USE1-202ENST00000445667 PAQR5Q9NXK6 330 aaPredicted RBP13.22□□□□□ -0.29
USE1-202ENST00000445667 DNAJB12Q9NXW2 375 aaKnown RBP13.22□□□□□ -0.29
USE1-202ENST00000445667 MCTS1Q9ULC4 181 aaKnown RBP13.22□□□□□ -0.29
USE1-202ENST00000445667 A6NNC1 897 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 DNAJA2O60884 412 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 PLGP00747 810 aaPredicted RBP13.21□□□□□ -0.29
USE1-202ENST00000445667 ZCCHC18P0CG32 403 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 NR2F1P10589 423 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 FCGR2AP12318 317 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 ETFAP13804 333 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 RYKP34925 604 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 ANXA11P50995 505 aaKnown RBP13.21□□□□□ -0.29
USE1-202ENST00000445667 MVDP53602 400 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 SESN3P58005 492 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 STX1BP61266 288 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 SORDQ00796 357 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 MAPK11Q15759 364 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 SLC25A53Q5H9E4 307 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 C6orf10Q5SRN2 563 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 SLC2A7Q6PXP3 512 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 LRRC74BQ6ZQY2 392 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 FAM214BQ7L5A3 538 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 CDH24Q86UP0 819 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 FUNDC1Q8IVP5 155 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 FAM71CQ8NEG0 241 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 MAGEB18Q96M61 343 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 CCDC28BQ9BUN5 200 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 POLDIP3Q9BY77 421 aaKnown RBP13.21□□□□□ -0.29
USE1-202ENST00000445667 SRXN1Q9BYN0 137 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 TPT1P8Q9HAU6 139 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.21□□□□□ -0.29
USE1-202ENST00000445667 LIPT1Q9Y234 373 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 SLC35A3Q9Y2D2 325 aa13.21□□□□□ -0.29
USE1-202ENST00000445667 CREBBPQ92793 2442 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 A0A1W2PNR3 127 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 FAM221AA4D161 298 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 ETV2O00321 342 aaPredicted RBP13.2□□□□□ -0.3
USE1-202ENST00000445667 PGCP20142 388 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 CRATP43155 626 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 KCNJ5P48544 419 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 TXNL4AP83876 142 aaKnown RBP13.2□□□□□ -0.3
USE1-202ENST00000445667 PLAURQ03405 335 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 MERTKQ12866 999 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 DAZAP2Q15038 168 aaPredicted RBP13.2□□□□□ -0.3
USE1-202ENST00000445667 MSANTD1Q6ZTZ1 278 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 CNOT9Q92600 299 aaKnown RBP13.2□□□□□ -0.3
USE1-202ENST00000445667 GTF2H4Q92759 462 aa13.2□□□□□ -0.3
USE1-202ENST00000445667 GMPPAQ96IJ6 420 aaPredicted RBP13.2□□□□□ -0.3
USE1-202ENST00000445667 PAIP1Q9H074 479 aaKnown RBP13.2□□□□□ -0.3
USE1-202ENST00000445667 COQ10BQ9H8M1 238 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms