RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 LINGO3P0C6S8 592 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 FAM87AP0C7U9 286 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 ITGA2P17301 1181 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 RHCEP18577 417 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 FUT4P22083 530 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 PIN1Q13526 163 aaPredicted RBP13.74□□□□□ -0.21
CCNE1-203ENST00000444983 CBFBQ13951 182 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 TOMM34Q15785 309 aaPredicted RBP13.74□□□□□ -0.21
CCNE1-203ENST00000444983 ENTPD8Q5MY95 495 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 RANBP3LQ86VV4 465 aaPredicted RBP13.74□□□□□ -0.21
CCNE1-203ENST00000444983 ADAMTS16Q8TE57 1224 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 MCHR1Q99705 422 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 ZNF559Q9BR84 538 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 POLR2J2Q9GZM3 115 aaKnown RBP13.74□□□□□ -0.21
CCNE1-203ENST00000444983 POLR2J3Q9H1A7 115 aaKnown RBP13.74□□□□□ -0.21
CCNE1-203ENST00000444983 NTNG1Q9Y2I2 539 aa13.74□□□□□ -0.21
CCNE1-203ENST00000444983 NBEAQ8NFP9 2946 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 SPENQ96T58 3664 aaKnown RBP13.73□□□□□ -0.21
CCNE1-203ENST00000444983 HNRNPRO43390 633 aaKnown RBP13.73□□□□□ -0.21
CCNE1-203ENST00000444983 LYPD3O95274 346 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 RFPL3SP0C7P2 107 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 RYKP34925 604 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 MASP1P48740 699 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 ARSKQ6UWY0 536 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 DEF8Q6ZN54 512 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 LILRA2Q8N149 483 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 C1GALT1C1Q96EU7 318 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 DHRS1Q96LJ7 313 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 ZNF597Q96LX8 424 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 PRRC1Q96M27 445 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 TRIM2Q9C040 744 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 ADAM19Q9H013 955 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 YY1AP1Q9H869 796 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 AGPAT4Q9NRZ5 378 aa13.73□□□□□ -0.21
CCNE1-203ENST00000444983 A0A0B4J2E0 115 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 A0A1B0GX12 115 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 H0YHG0 523 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 TIPRLO75663 272 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 DIRAS1O95057 198 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 WISP1O95388 367 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 NTN1O95631 604 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 PGCP20142 388 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 SLC1A3P43003 542 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 YAP1P46937 504 aaKnown RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 IDH2P48735 452 aaKnown RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 MEOX1P50221 254 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 HMGA2P52926 109 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 RIPK1Q13546 671 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 ZNF169Q14929 603 aaPredicted RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 OR1Q1Q15612 314 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 SLC25A53Q5H9E4 307 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 WBP2NLQ6ICG8 309 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 ZNF613Q6PF04 617 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 ASB18Q6ZVZ8 466 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 TMCO5AQ8N6Q1 288 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 EXD3Q8N9H8 876 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 ZNF347Q96SE7 839 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 PIP5K1AQ99755 562 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 PTGES2Q9H7Z7 377 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 NMNAT1Q9HAN9 279 aaPredicted RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 NTN4Q9HB63 628 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 BOKQ9UMX3 212 aaPredicted RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 B3GNT3Q9Y2A9 372 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 C15orf41Q9Y2V0 281 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 MRPS18CQ9Y3D5 142 aaKnown RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 GMFGO60234 142 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 ZIC3O60481 467 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 OR5F1O95221 314 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 PRKCAP17252 672 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 CCR4P51679 360 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 DSCR4P56555 118 aaPredicted RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 SESN3P58005 492 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 QPRTQ15274 297 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 TMEM44Q2T9K0 475 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 PLPPR5Q32ZL2 321 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 OR2T5Q6IEZ7 315 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 HMBOX1Q6NT76 420 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 RPUSD3Q6P087 351 aaKnown RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 C19orf48Q6RUI8 117 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 LINC00114Q6XXX2 140 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 OFCC1Q8IZS5 231 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 PIK3C3Q8NEB9 887 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 OR2T29Q8NH02 315 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 C9orf43Q8TAL5 461 aaPredicted RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 ST8SIA1Q92185 356 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 NR4A3Q92570 626 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 STMN2Q93045 179 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 C3orf49Q96BT1 292 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 JSRP1Q96MG2 331 aaPredicted RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 NPAS1Q99742 590 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 TTTY12Q9BZ98 90 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 ZNF703Q9H7S9 590 aaPredicted RBP13.72□□□□□ -0.21
CCNE1-203ENST00000444983 ACER3Q9NUN7 267 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 MED17Q9NVC6 651 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 RIMS3Q9UJD0 308 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 FREM3P0C091 2139 aa13.72□□□□□ -0.21
CCNE1-203ENST00000444983 PRRC2CQ9Y520 2896 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms