RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 ARL8BQ9NVJ2 186 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 STOML1Q9UBI4 398 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 ANGPT4Q9Y264 503 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
USP1-203ENST00000442679 AP4B1Q9Y6B7 739 aa11.14□□□□□ -0.63
USP1-203ENST00000442679 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 CDHR4A6H8M9 788 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 CFAP73A6NFT4 308 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 H0Y3Z8 333 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 H3BML4 177 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 NDUFAB1O14561 156 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 SERPINB7O75635 380 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 LDLRP01130 860 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 ZNF708P17019 499 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 PRKCAP17252 672 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 PSMA4P25789 261 aaKnown RBP11.13□□□□□ -0.63
USP1-203ENST00000442679 ADH6P28332 368 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 CLDN18P56856 261 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 PMPCAQ10713 525 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 FOXF1Q12946 379 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 VMACQ2NL98 169 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 SLC25A53Q5H9E4 307 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 RNF220Q5VTB9 566 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 FAM91A1Q658Y4 838 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 RTL6Q6ICC9 239 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 NCCRP1Q6ZVX7 275 aaPredicted RBP11.13□□□□□ -0.63
USP1-203ENST00000442679 ARPINQ7Z6K5 226 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 GRAMD2AQ8IUY3 354 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 ZNF440Q8IYI8 595 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 MEIOBQ8N635 442 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 FITM2Q8N6M3 262 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 ZNF563Q8TA94 476 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 ZPLD1Q8TCW7 415 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 BCAS4Q8TDM0 211 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 SSC4DQ8WTU2 575 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 PHF10Q8WUB8 498 aaKnown RBP11.13□□□□□ -0.63
USP1-203ENST00000442679 TMEM234Q8WY98 164 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 ST8SIA1Q92185 356 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 SMPDL3BQ92485 455 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 REXO5Q96IC2 774 aaKnown RBP11.13□□□□□ -0.63
USP1-203ENST00000442679 ZNF583Q96ND8 569 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 ACER3Q9NUN7 267 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 CMTM6Q9NX76 183 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 TAGLN3Q9UI15 199 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 AP3M1Q9Y2T2 418 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 FAM215AQ9Y5M1 114 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 SVILO95425 2214 aa11.13□□□□□ -0.63
USP1-203ENST00000442679 POLEQ07864 2286 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 ESPL1Q14674 2120 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 PRORSD1PA6NEY8 169 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 WIPF3A6NGB9 483 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 CCT8L1PA6NM43 557 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 M0QX08 132 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 ETV2O00321 342 aaPredicted RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 AP3D1O14617 1153 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 SEC14L5O43304 696 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 EFNA2O43921 213 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 ZG16O60844 167 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 ADAM11O75078 769 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 GCM2O75603 506 aaPredicted RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 NTN1O95631 604 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 EPPINO95925 133 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 OPN1LWP04000 364 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 GKN3PP0CG01 181 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 GLI4P10075 376 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 GP1BBP13224 206 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 IL11P20809 199 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 ME2P23368 584 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 PRKAR1BP31321 381 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 PCGF2P35227 344 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 CPA2P48052 419 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 IDH2P48735 452 aaKnown RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 SLC7A2P52569 658 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 SMSP52788 366 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 CLDN15P56746 228 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 CLDN20P56880 219 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 PCBP3P57721 371 aaKnown RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 NUP107P57740 925 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 EEFSECP57772 596 aaKnown RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 SESN3P58005 492 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 PSME3P61289 254 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 RAC1P63000 192 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 MERTKQ12866 999 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 INTS11Q5TA45 600 aaKnown RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 C8orf82Q6P1X6 216 aaPredicted RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 RPTNQ6XPR3 784 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 CHMP1BQ7LBR1 199 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 ZNF550Q7Z398 422 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 PATL1Q86TB9 770 aaKnown RBP11.12□□□□□ -0.63
USP1-203ENST00000442679 ARMC8Q8IUR7 673 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 SLC15A3Q8IY34 581 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 LILRA2Q8N149 483 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 MARVELD2Q8N4S9 558 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 MRGPRX4Q96LA9 322 aa11.12□□□□□ -0.63
USP1-203ENST00000442679 TRIB1Q96RU8 372 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms