RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SUSD6Q92537 303 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 GTF3AQ92664 365 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 SENP8Q96LD8 212 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 TECTBQ96PL2 329 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 VPS35Q96QK1 796 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 HSD17B14Q9BPX1 270 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 TMEM43Q9BTV4 400 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 RACGAP1Q9H0H5 632 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 FAM124BQ9H5Z6 455 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 WDR55Q9H6Y2 383 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 PANK3Q9H999 370 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 COG4Q9H9E3 785 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 ECHDC1Q9NTX5 307 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 ARMC1Q9NVT9 282 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 FLRT3Q9NZU0 649 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 ERRFI1Q9UJM3 462 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZNF490Q9ULM2 529 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 UMODL1Q5DID0 1318 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 SALL1Q9NSC2 1324 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 RFX7Q2KHR2 1363 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 CNTLNQ9NXG0 1405 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 FRMPD1Q5SYB0 1578 aa3.59□□□□□ -1.83
CDC42BPA-207ENST00000441725 A0A087WUV0 522 aaPredicted RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 GLTPD2A6NH11 291 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 PDZK1P1A8MUH7 402 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 A8MUI8 341 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 MIF4GDA9UHW6 222 aaKnown RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 ARPC1BO15143 372 aaKnown RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 MAGEC1O60732 1142 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 PFDN1O60925 122 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 SMIM24O75264 130 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 RPS17P08708 135 aaKnown RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 PNMTP11086 282 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 GP9P14770 177 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 CNR1P21554 472 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 SYT1P21579 422 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 CCNOP22674 350 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 FEN1P39748 380 aaKnown RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 CD79BP40259 229 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 P2RY4P51582 365 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 CDH4P55283 916 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 ATP5J2P56134 94 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAB4BP61018 213 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAB11AP62491 216 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 GPR17Q13304 367 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 ELAVL3Q14576 367 aaKnown RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 RAB11BQ15907 218 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 DUSP5Q16690 384 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 PDZK1Q5T2W1 519 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 TTC23Q5W5X9 447 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 TCEAL6Q6IPX3 200 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZSCAN25Q6NSZ9 544 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 TMEM207Q6UWW9 146 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 HSDL2Q6YN16 418 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC13A5Q86YT5 568 aaPredicted RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 KIRREL3Q8IZU9 778 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 FBXL16Q8N461 479 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 RELL2Q8NC24 303 aaPredicted RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 C19orf18Q8NEA5 215 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF397Q8NF99 534 aaPredicted RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR5D18Q8NGL1 313 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR5D13Q8NGL4 314 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 MCUR1Q96AQ8 359 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 ANKRD36BP1Q96IX9 119 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 NDUFAF3Q9BU61 184 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 WRAP53Q9BUR4 548 aaKnown RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 PAPOLGQ9BWT3 736 aaKnown RBP3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 STRADBQ9C0K7 418 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 VIPAS39Q9H9C1 493 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF160Q9HCG1 818 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 PPP2R2CQ9Y2T4 447 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 TNFRSF18Q9Y5U5 241 aa3.59□□□□□ -1.84
CDC42BPA-207ENST00000441725 CUX1P39880 1505 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SHISA7A6NL88 538 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SMLR1H3BR10 107 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 LAD1O00515 517 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 EPHB6O15197 1021 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TOX3O15405 576 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 FCMRO60667 390 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 LRCH4O75427 683 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 WBP4O75554 376 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TSHBP01222 138 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CRYABP02511 175 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 FCER2P06734 321 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 RNF224P0DH78 156 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 LIFP15018 202 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 CBR1P16152 277 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 ACADVLP49748 655 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 RIDAP52758 137 aaKnown RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 DCDC1P59894 354 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 SEC61GP60059 68 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 REEP5Q00765 189 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 NAAAQ02083 359 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 IFFO1Q0D2I5 559 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 C3AR1Q16581 482 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 TPD52L1Q16890 204 aaPredicted RBP3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 PYHIN1Q6K0P9 492 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 UNQ6126/PRO20091Q6UXV3 157 aa3.58□□□□□ -1.84
CDC42BPA-207ENST00000441725 LRRC74BQ6ZQY2 392 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms