RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 QPRTQ15274 297 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 GPAT3Q53EU6 434 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 EIF3MQ7L2H7 374 aaKnown RBP17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 RAB3IL1Q8TBN0 382 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 GPR119Q8TDV5 335 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 RAB8BQ92930 207 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 CPNE4Q96A23 557 aaPredicted RBP17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 MRGPRX4Q96LA9 322 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 ZNF350Q9GZX5 532 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 WDR55Q9H6Y2 383 aaPredicted RBP17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 MANSC1Q9H8J5 431 aa17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 C6orf203Q9P0P8 240 aaPredicted RBP17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 MAP1AP78559 2803 aaPredicted RBP17.78■□□□□ 0.44
SHROOM1-204ENST00000440118 ANKRD28O15084 1053 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 FCMRO60667 390 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 ALDOCP09972 364 aaKnown RBP17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 SHC1P29353 583 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 TOMM34Q15785 309 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 ZNF239Q16600 458 aaKnown RBP17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 TMEM176BQ3YBM2 270 aaPredicted RBP17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 TMEM201Q5SNT2 666 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 SAXO2Q658L1 398 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 OLIG3Q7RTU3 272 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 ZNF550Q7Z398 422 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 MIPOL1Q8TD10 442 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 ZFP90Q8TF47 636 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 ROBO4Q8WZ75 1007 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 ROPN1LQ96C74 230 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 NEURL3Q96EH8 262 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 CCDC115Q96NT0 180 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 WFIKKN1Q96NZ8 548 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 OR52E6Q96RD3 313 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 C12orf49Q9H741 205 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 BTNL2Q9UIR0 455 aa17.77■□□□□ 0.44
SHROOM1-204ENST00000440118 KIAA0513O60268 411 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 SNNO75324 88 aaPredicted RBP17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 CGAP01215 116 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 PGRP06401 933 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 IDO1P14902 403 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 CCKARP32238 428 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 PCYT1AP49585 367 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 SLC18A1P54219 525 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 PHC1P78364 1004 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 LRRC74AQ0VAA2 488 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 RNPS1Q15287 305 aaKnown RBP17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 GUSBP1Q15486 140 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 ZNF141Q15928 474 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 C3orf33Q6P1S2 294 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 RNF130Q86XS8 419 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 ZNF563Q8TA94 476 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 TMEM234Q8WY98 164 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 PIK3IP1Q96FE7 263 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 THUMPD3Q9BV44 507 aaKnown RBP17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 LAT2Q9GZY6 243 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 TMBIM4Q9HC24 238 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 POLE3Q9NRF9 147 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 SLC35A3Q9Y2D2 325 aa17.76■□□□□ 0.43
SHROOM1-204ENST00000440118 PRRC2AP48634 2157 aaKnown RBP17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 CCDC154A6NI56 674 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 SCN2BO60939 215 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 UGT2B17O75795 530 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 PGCP20142 388 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 AGTR1P30556 359 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 SKP2Q13309 424 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 TIGD2Q4W5G0 525 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 BEND6Q5SZJ8 279 aaPredicted RBP17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 ANKRD34AQ69YU3 496 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 HEPHL1Q6MZM0 1159 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 DNAJC14Q6Y2X3 702 aaPredicted RBP17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 ZNF621Q6ZSS3 439 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 FCRLAQ7L513 359 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 ZNF619Q8N2I2 560 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 GLB1L3Q8NCI6 653 aaPredicted RBP17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 ABHD3Q8WU67 409 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 ST8SIA1Q92185 356 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 ARSGQ96EG1 525 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 MARK4Q96L34 752 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 TEX37Q96LM6 180 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 ALPK1Q96QP1 1244 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 SRXN1Q9BYN0 137 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 SERINC1Q9NRX5 453 aa17.75■□□□□ 0.43
SHROOM1-204ENST00000440118 C2CD3Q4AC94 2353 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 CENPVL1A0A0U1RR11 272 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 ANP32DO95626 131 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 MERTKQ12866 999 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 TYW3Q6IPR3 259 aaKnown RBP17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 BEND4Q6ZU67 534 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 HMGN2P46Q86SG4 172 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 PNPT1Q8TCS8 783 aaKnown RBP17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 RNF128Q8TEB7 428 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 OIT3Q8WWZ8 545 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 TLCD1Q96CP7 247 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 OR5B2Q96R09 309 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 PLEKHF2Q9H8W4 249 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 PLSCR4Q9NRQ2 329 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 GPR45Q9Y5Y3 372 aa17.74■□□□□ 0.43
SHROOM1-204ENST00000440118 A0A1W2PNR3 127 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 RFXANKO14593 260 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 DIAPH2O60879 1101 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 ATE1O95260 518 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms