RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ADRM1Q16186 407 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 RPS26P11Q5JNZ5 115 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 MRPL2Q5T653 305 aaKnown RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 RNF220Q5VTB9 566 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 NANOGP8Q6NSW7 305 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 SEM1Q6ZVN7 128 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 CHMP1BQ7LBR1 199 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 MAMDC2Q7Z304 686 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 PIGWQ7Z7B1 504 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 SERPINA11Q86U17 422 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 GRAMD2AQ8IUY3 354 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 SLC30A8Q8IWU4 369 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF440Q8IYI8 595 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 C10orf111Q8N326 155 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 HIPK4Q8NE63 616 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 OR8J3Q8NGG0 315 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 OR10Q1Q8NGQ4 319 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 MBD3L2Q8NHZ7 208 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 NFKBIDQ8NI38 313 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 SDCCAG3Q96C92 435 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 TRIB1Q96RU8 372 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 KLHDC3Q9BQ90 382 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 SPATA5L1Q9BVQ7 753 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 SPATA9Q9BWV2 254 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 MYLK2Q9H1R3 596 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 KAT8Q9H7Z6 458 aaKnown RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 NANOGQ9H9S0 305 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 ACER3Q9NUN7 267 aa10.66□□□□□ -0.7
HSPG2-206ENST00000439717 PAQR5Q9NXK6 330 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 DNAJB12Q9NXW2 375 aaKnown RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF443Q9Y2A4 671 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 KLF2Q9Y5W3 355 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-206ENST00000439717 A0A0G2JNJ9 132 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CLDN24A6NM45 220 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 GJE1A6NN92 205 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CLCA1A8K7I4 914 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 FXYD1O00168 92 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 FAAHO00519 579 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 BCAS1O75363 584 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CLDN14O95500 239 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CLDN1O95832 211 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 PABPC4LP0CB38 370 aaKnown RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 COX4I1P13073 169 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 UQCRBP14927 111 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CEACAM8P31997 349 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CLDN15P56746 228 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 RPS3AP61247 264 aaKnown RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 EEF1A1P68104 462 aaKnown RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 PLAURQ03405 335 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 FOXF1Q12946 379 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 SCARB2Q14108 478 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 SELPLGQ14242 412 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CAPRIN1Q14444 709 aaKnown RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 TOMM34Q15785 309 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CYP51A1Q16850 503 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF311Q5JNZ3 666 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF836Q6ZNA1 936 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 ESPNLQ6ZVH7 1005 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 NET1Q7Z628 596 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 HMGN2P46Q86SG4 172 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 GGNQ86UU5 652 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 VRK2Q86Y07 508 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 KRT73Q86Y46 540 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 UBQLNLQ8IYU4 475 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 C11orf65Q8NCR3 313 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 FBXO27Q8NI29 283 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF563Q8TA94 476 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CA5BP1Q8WTZ4 195 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CNOT9Q92600 299 aaKnown RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 WNT2BQ93097 391 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 SLC35B4Q969S0 331 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CMTM5Q96DZ9 223 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 ZFP3Q96NJ6 502 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 NPAS1Q99742 590 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 TM9SF2Q99805 663 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 CLCF1Q9UBD9 225 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 PLEKHB1Q9UF11 243 aaPredicted RBP10.65□□□□□ -0.7
HSPG2-206ENST00000439717 Q9UFV3 132 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 RNF6Q9Y252 685 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 ANGPT4Q9Y264 503 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 ARL2BPQ9Y2Y0 163 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 ZNF175Q9Y473 711 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 LRRK2Q5S007 2527 aa10.65□□□□□ -0.7
HSPG2-206ENST00000439717 COL12A1Q99715 3063 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 DOPEY1Q5JWR5 2465 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 NCOA6Q14686 2063 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-206ENST00000439717 PHF3Q92576 2039 aaKnown RBP10.64□□□□□ -0.71
HSPG2-206ENST00000439717 A1L4Q6 167 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 CFAP73A6NFT4 308 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 ADAMDEC1O15204 470 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 SEC14L5O43304 696 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 SERPINB7O75635 380 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 RCBTB2O95199 551 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 IL2RAP01589 272 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 GP1BBP13224 206 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 FKBP2P26885 142 aaKnown RBP10.64□□□□□ -0.71
HSPG2-206ENST00000439717 PRDX6P30041 224 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 PRKAR1BP31321 381 aa10.64□□□□□ -0.71
HSPG2-206ENST00000439717 APOBEC1P41238 236 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms