RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 KLHL1Q9NR64 748 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 ACER3Q9NUN7 267 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 TUBA8Q9NY65 449 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-202ENST00000439369 TAS2R10Q9NYW0 307 aa11.54□□□□□ -0.56
SCLT1-202ENST00000439369 A0A0G2JMM0 328 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 A0A1W2PPB8 328 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 A0A1W2PRS3 328 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 KIR3DP1A8MWS1 328 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 G3V3Y1 287 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ACOT7O00154 380 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 GNB5O14775 395 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ADAMDEC1O15204 470 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 FRS3O43559 492 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 TPST2O60704 377 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ADAM11O75078 769 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 KRT36O76013 467 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 PRSS23O95084 383 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 NTN1O95631 604 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 NUDT14O95848 222 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 FAM87AP0C7U9 286 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 PNMTP11086 282 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 GP1BBP13224 206 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF17P17021 662 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 FASP25445 335 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 FKBP2P26885 142 aaKnown RBP11.53□□□□□ -0.56
SCLT1-202ENST00000439369 CD97P48960 835 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 RNF144AP50876 292 aaPredicted RBP11.53□□□□□ -0.56
SCLT1-202ENST00000439369 GPR85P60893 370 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ENTPD8Q5MY95 495 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ULK3Q6PHR2 472 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 DEF8Q6ZN54 512 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 PLEKHM3Q6ZWE6 761 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 GRINAQ7Z429 371 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF605Q86T29 641 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 SLC22A16Q86VW1 577 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 RBM45Q8IUH3 476 aaKnown RBP11.53□□□□□ -0.56
SCLT1-202ENST00000439369 PIK3C3Q8NEB9 887 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 PNPLA2Q96AD5 504 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 MPP4Q96JB8 637 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 HES7Q9BYE0 225 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 OR2B2Q9GZK3 357 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ADAM19Q9H013 955 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 UBQLN3Q9H347 655 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ZNF703Q9H7S9 590 aaPredicted RBP11.53□□□□□ -0.56
SCLT1-202ENST00000439369 DCLRE1BQ9H816 532 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 SELENONQ9NZV5 590 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 MED11Q9P086 117 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 RPS6KB2Q9UBS0 482 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 DNAJB9Q9UBS3 223 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 A4GNTQ9UNA3 340 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 CSAG2Q9Y5P2 127 aa11.53□□□□□ -0.56
SCLT1-202ENST00000439369 ANKRD11Q6UB99 2663 aaPredicted RBP11.52□□□□□ -0.57
SCLT1-202ENST00000439369 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 A0A0B4J2E0 115 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 A0A1B0GX12 115 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 A0A1W2PRQ8 180 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 HTR3EA5X5Y0 456 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 B4DXG7 233 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 H3BNX3 289 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 LINC01387J3KSC0 135 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 K7EM74 188 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 hCG_2039718K7EN88 272 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 CHP2O43745 196 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 LDLRP01130 860 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 HPNP05981 417 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 PRKCAP17252 672 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 DPP4P27487 766 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 HTR2AP28223 471 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 RYKP34925 604 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 APOBEC1P41238 236 aaKnown RBP11.52□□□□□ -0.57
SCLT1-202ENST00000439369 IDH2P48735 452 aaKnown RBP11.52□□□□□ -0.57
SCLT1-202ENST00000439369 TAS2R41P59536 307 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 DGCR6Q14129 220 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 QPRTQ15274 297 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 OR1Q1Q15612 314 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 ATP6AP1Q15904 470 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 TMEM44Q2T9K0 475 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 PLPPR5Q32ZL2 321 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 COLEC12Q5KU26 742 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 SLC6A19Q695T7 634 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 OR5M10Q6IEU7 315 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 OR2T5Q6IEZ7 315 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 OR2T29Q8NH02 315 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 ZNF563Q8TA94 476 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 ADAMTS16Q8TE57 1224 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 PYDC1Q8WXC3 89 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 CRELD1Q96HD1 420 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 JSRP1Q96MG2 331 aaPredicted RBP11.52□□□□□ -0.57
SCLT1-202ENST00000439369 CNTNAP3BQ96NU0 1288 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 GNRHR2Q96P88 292 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 WFDC6Q9BQY6 131 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 FNDC11Q9BVV2 318 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 CNTNAP3Q9BZ76 1288 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 TTTY12Q9BZ98 90 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 AGPAT4Q9NRZ5 378 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 MED17Q9NVC6 651 aa11.52□□□□□ -0.57
SCLT1-202ENST00000439369 C6orf203Q9P0P8 240 aaPredicted RBP11.52□□□□□ -0.57
SCLT1-202ENST00000439369 RIMS3Q9UJD0 308 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms