RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TWISTNBQ3B726 338 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 ARMC3Q5W041 872 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 CGB2Q6NT52 195 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 IGFL2Q6UWQ7 119 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 RBPMS2Q6ZRY4 209 aaKnown RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 ERN2Q76MJ5 926 aaKnown RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 PHLDB2Q86SQ0 1253 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 ACOT1Q86TX2 421 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 TEX9Q8N6V9 391 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF525Q8N782 197 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 DCAF4L2Q8NA75 395 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 KCTD6Q8NC69 237 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 TSEN15Q8WW01 171 aaKnown RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 SPATA17Q96L03 361 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 RMDN2Q96LZ7 410 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 GDAP1L1Q96MZ0 367 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZMAT2Q96NC0 199 aaKnown RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 ANKRD27Q96NW4 1050 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 RCHY1Q96PM5 261 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 MCCC1Q96RQ3 725 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 PCDHB18PQ96TA0 734 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 PINK1Q9BXM7 581 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 OR10A4Q9H209 315 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 LINC00597Q9H2U6 94 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 SNX25Q9H3E2 840 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 METTL17Q9H7H0 456 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 MTRRQ9UBK8 725 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 GIMAP2Q9UG22 337 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 RNF6Q9Y252 685 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 CA5BQ9Y2D0 317 aa1.88□□□□□ -2.11
HMGB1P18-201ENST00000438801 EML6Q6ZMW3 1958 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 FOXI3A8MTJ6 420 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 WASH3PC4AMC7 463 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 PSMA7O14818 248 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 RASGRF2O14827 1237 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 SCO2O43819 266 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 TBCAO75347 108 aaKnown RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 DEDDO75618 318 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 RHBDL1O75783 438 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ANGPTL1O95841 491 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 IGKV5-2P06315 115 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 APOA4P06727 396 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 EZRP15311 586 aaKnown RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 PPP2R1AP30153 589 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 PRKAR2BP31323 418 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 PEX19P40855 299 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ADARP55265 1226 aaKnown RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 MTCP1P56278 107 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 SULT2A1Q06520 285 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 SCARB2Q14108 478 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 FASTKQ14296 549 aaKnown RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 PCK2Q16822 640 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 LRRC37A5PQ49AS3 106 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 CCDC158Q5M9N0 1113 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ASPHD2Q6ICH7 369 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 RFWD3Q6PCD5 774 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF600Q6ZNG1 722 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 OTOAQ7RTW8 1153 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 COX8CQ7Z4L0 72 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 SLFN11Q7Z7L1 901 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 SNX32Q86XE0 403 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 CCDC71Q8IV32 467 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 CARNMT1Q8N4J0 409 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ARL6IP6Q8N6S5 226 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 Q8N9G6 341 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 PAQR8Q8TEZ7 354 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 FAM162AQ96A26 154 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 SPSB1Q96BD6 273 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF799Q96GE5 643 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 CTRCQ99895 268 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 HSD17B14Q9BPX1 270 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ADPGKQ9BRR6 497 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 LHX5Q9H2C1 402 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 TSPY26PQ9H489 355 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 PLEKHA3Q9HB20 300 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 IARS2Q9NSE4 1012 aaKnown RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 RBM28Q9NW13 759 aaKnown RBP1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ANAPC5Q9UJX4 755 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ITGA11Q9UKX5 1188 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 NUDCQ9Y266 331 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 KNSTRNQ9Y448 316 aa1.87□□□□□ -2.11
HMGB1P18-201ENST00000438801 ARFGEF3Q5TH69 2177 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 RAI1Q7Z5J4 1906 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 E5RGE8 158 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 H7C0S8 307 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 IFIT3O14879 490 aaKnown RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 B4GAT1O43505 415 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 TSC22D2O75157 780 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 KLK3P07288 261 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 UQCRFS1P1P0C7P4 283 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 ODC1P11926 461 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 ABOP16442 354 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 MDKP21741 143 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 CPT2P23786 658 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 MC5RP33032 325 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 HSPA4P34932 840 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 BRCC3P46736 316 aa1.86□□□□□ -2.11
HMGB1P18-201ENST00000438801 ZNF41P51814 821 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms