RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 FADS3Q9Y5Q0 445 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 HEMK1Q9Y5R4 338 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 AUP1Q9Y679 476 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 CCDC7Q96M83 1385 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 MAP3K5Q99683 1374 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 JCADQ9P266 1359 aa3.24□□□□□ -1.89
HMGB1P12-201ENST00000438594 ADGRA2Q96PE1 1338 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 A0A1B0GUS0 222 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 HYKKA2RU49 373 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR2M5A3KFT3 312 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 LRP5LA4QPB2 252 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SHISA7A6NL88 538 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 E5RGE8 158 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 E5RJQ4 531 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR7A17O14581 309 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CHST1O43916 411 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 FCN3O75636 299 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SC5DO75845 299 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 B3GAT3O94766 335 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 STK17BO94768 372 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 LYPLA2O95372 231 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 DEXIO95424 95 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 NR3C1P04150 777 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 NHLRC4P0CG21 123 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 GSTT2P0CG29 244 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 GSTT2BP0CG30 244 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 NR2C1P13056 603 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 UQCRBP14927 111 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ARSBP15848 533 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 POLR2EP19388 210 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 KITLGP21583 273 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 TBXA2RP21731 343 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 BGNP21810 368 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 GABRR2P28476 465 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CD1CP29017 333 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 BDKRB2P30411 391 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CHRNA5P30532 468 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 HNRNPH1P31943 449 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CCKARP32238 428 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 HPCAL1P37235 193 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 COILP38432 576 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SLC26A3P40879 764 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 RANBP1P43487 201 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 P2RY1P47900 373 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 RFX5P48382 616 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SOX2P48431 317 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ALDH3B2P48448 385 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 EFNB2P52799 333 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 HNRNPH2P55795 449 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 TPTEP56180 551 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CD81P60033 236 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 MAGOHP61326 146 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ERVK11-1P61568 191 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ARF6P62330 175 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 RBBP4Q09028 425 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 MGAT3Q09327 533 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 BNIP2Q12982 314 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 PLA2G7Q13093 441 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SELENBP1Q13228 472 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ORC2Q13416 577 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 IMPG1Q17R60 797 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 QRICH1Q2TAL8 776 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF699Q32M78 642 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 MIDNQ504T8 468 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 PIGGQ5H8A4 983 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 EARS2Q5JPH6 523 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CEP85LQ5SZL2 805 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF776Q68DI1 518 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 STUMQ69YW2 141 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SPOPLQ6IQ16 392 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 APOBEC3HQ6NTF7 200 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 FUT10Q6P4F1 479 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 UNQ6126/PRO20091Q6UXV3 157 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMPRSS11AQ6ZMR5 421 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 MBOAT1Q6ZNC8 495 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 DCDC5Q6ZRR9 648 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 Q6ZWC4 215 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 NIPA1Q7RTP0 329 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 TFAP2DQ7Z6R9 452 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CRLF3Q8IUI8 442 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 MMD2Q8IY49 270 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 C10orf67Q8IYJ2 551 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CDRT4Q8N9R6 151 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 INO80EQ8NBZ0 244 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ADAD2Q8NCV1 583 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR4K1Q8NGD4 311 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR4A4PQ8NGN8 299 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SPPL2AQ8TCT8 520 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ADAMTS16Q8TE57 1224 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 PSMG2Q969U7 264 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SCRN2Q96FV2 425 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 DNAJC1Q96KC8 554 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 RNF145Q96MT1 663 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 AGPAT1Q99943 283 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CCDC3Q9BQI4 270 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 NICN1Q9BSH3 213 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 PAPOLGQ9BWT3 736 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ULBP2Q9BZM5 246 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 RACGAP1Q9H0H5 632 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SEMA6AQ9H2E6 1030 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms