RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TMEM38AQ9H6F2 299 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 TREM1Q9NP99 234 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 NPDC1Q9NQX5 325 aaPredicted RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 FARS2O95363 451 aaKnown RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 NR2F1P10589 423 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 PYCR1P32322 319 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ACSM3Q53FZ2 586 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 AVPI1Q5T686 147 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 RNLSQ5VYX0 342 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 LIN54Q6MZP7 749 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 PRICKLE2Q7Z3G6 844 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 JAZF1Q86VZ6 243 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF485Q8NCK3 441 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 OR5J2Q8NH18 312 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 PTDSS2Q9BVG9 487 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 PINK1Q9BXM7 581 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 SLC6A16Q9GZN6 736 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 GKN1Q9NS71 199 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ASB6Q9NWX5 421 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 GHRLQ9UBU3 117 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 UBE2QL1A1L167 161 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 OR2AG2A6NM03 316 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF705EA8MWA4 302 aaPredicted RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 SCAMP1O15126 338 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 UBXN7O94888 489 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 IL3P08700 152 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 IFNGR1P15260 489 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 MANFP55145 182 aaKnown RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 GMFBP60983 142 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 UPP1Q16831 310 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 OR5W2Q8NH69 310 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 ABHD4Q8TB40 342 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 KCTD12Q96CX2 325 aaKnown RBP6.96□□□□□ -1.3
CPSF6-202ENST00000435070 A4GNTQ9UNA3 340 aa6.96□□□□□ -1.3
CPSF6-202ENST00000435070 COL4A5P29400 1685 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PQLC2LA1A4F0 135 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 DRGXA6NNA5 263 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 H3BSH0 61 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 GPR37L1O60883 481 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CNMDO75829 334 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CSF2RBP32927 897 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CTNNB1P35222 781 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 NPBWR1P48145 328 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PITPNAQ00169 270 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CDK5Q00535 292 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF763Q0D2J5 394 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 STX4Q12846 297 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 RAB33AQ14088 237 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 KIAA1211LQ6NV74 962 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 NXPE1Q8N323 547 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PRRG4Q9BZD6 226 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 MAGEH1Q9H213 219 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 GPN1Q9HCN4 374 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 OPN4Q9UHM6 478 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 A0A087WUU8 490 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TBC1D3BA6NDS4 549 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PYCARD-AS1I3L0S3 204 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 MAGEB1P43366 347 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PGDP52209 483 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 FAM76BQ5HYJ3 339 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 FCRLBQ6BAA4 426 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 SVBPQ8N300 66 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ACBD7Q8N6N7 88 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TMIEQ8NEW7 156 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TMEM159Q96B96 161 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 MAP3K3Q99759 626 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF251Q9BRH9 671 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 JAM3Q9BX67 310 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ANKRD19PQ9H560 264 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 HINT3Q9NQE9 182 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 MRPL17Q9NRX2 175 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 BACE2Q9Y5Z0 518 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 MEIS3P1A6NDR6 274 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 ICOSLGO75144 302 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 HTR3BO95264 441 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PPP2R1BP30154 601 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 HLA-FP30511 346 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 MMP15P51511 669 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 MAT1AQ00266 395 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 SNTB1Q13884 538 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 FAM26DQ5JW98 314 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 LRRTM1Q86UE6 522 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CMTM4Q8IZR5 234 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 CPXM2Q8N436 756 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 LILRA3Q8N6C8 439 aaPredicted RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 C1orf216Q8TAB5 229 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 EDARADDQ8WWZ3 215 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 RELTQ969Z4 430 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 COL26A1Q96A83 441 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PAPOLGQ9BWT3 736 aaKnown RBP6.95□□□□□ -1.3
CPSF6-202ENST00000435070 TAS2R10Q9NYW0 307 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PCDHB10Q9UN67 800 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 MOKQ9UQ07 419 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 NTNG1Q9Y2I2 539 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 IGSF6O95976 241 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PRPH2P23942 346 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 PDHA2P29803 388 aa6.95□□□□□ -1.3
CPSF6-202ENST00000435070 SLC6A12P48065 614 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms