RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ATP4BP51164 291 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 P2RX1P51575 399 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 MVDP53602 400 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 CLDN15P56746 228 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 FOXF2Q12947 444 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ART3Q13508 389 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 RCAN2Q14206 197 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 FGFBP1Q14512 234 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 QPRTQ15274 297 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 SF3B4Q15427 424 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 RGNQ15493 299 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 MAPK11Q15759 364 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF141Q15928 474 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF630Q2M218 657 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 TMEM176BQ3YBM2 270 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ACSF3Q4G176 576 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 RUNDC3AQ59EK9 446 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 METTL21CQ5VZV1 264 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 FRRS1Q6ZNA5 592 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 EIF3MQ7L2H7 374 aaKnown RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 P4HA3Q7Z4N8 544 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 MTERF4Q7Z6M4 381 aaKnown RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 VRK2Q86Y07 508 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 MISPQ8IVT2 679 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 MSRB3Q8IXL7 192 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 LILRA2Q8N149 483 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 C10orf111Q8N326 155 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 C9orf106Q8NAJ2 232 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 NAXEQ8NCW5 288 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 TOR1AIP2Q8NFQ8 470 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 LILRB4Q8NHJ6 448 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF563Q8TA94 476 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZPLD1Q8TCW7 415 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 GPR119Q8TDV5 335 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 SLC38A5Q8WUX1 472 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ASB5Q8WWX0 329 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 CNOT9Q92600 299 aaKnown RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 INTS12Q96CB8 462 aaKnown RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 DTNBP1Q96EV8 351 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 RNF145Q96MT1 663 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 TRNT1Q96Q11 434 aaKnown RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ELAC2Q9BQ52 826 aaKnown RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 SIKE1Q9BRV8 207 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 PINK1Q9BXM7 581 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 PRRG4Q9BZD6 226 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 NMUR2Q9GZQ4 415 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF350Q9GZX5 532 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 LAT2Q9GZY6 243 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 FAM107BQ9H098 131 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 PIF1Q9H611 641 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 MTHFD2LQ9H903 347 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 CALHM2Q9HA72 323 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 KCNJ16Q9NPI9 418 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 MED17Q9NVC6 651 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 SLC25A37Q9NYZ2 338 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 VAPAQ9P0L0 249 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 LEF1Q9UJU2 399 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 LIPT1Q9Y234 373 aa5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 NCOA6Q14686 2063 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P24-201ENST00000433260 A0A087WZY1 265 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 A0A0G2JPF8 293 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 A0A0J9YW62 118 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 TMEM247A6NEH6 219 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 HSPB2A8KAH6 182 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 EVPLLA8MZ36 301 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 HNRNPCL2B2RXH8 293 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 HNRNPCL3B7ZW38 293 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 FBP2O00757 339 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 AP3D1O14617 1153 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 TNFSF11O14788 317 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 CXCL13O43927 109 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 EIF4E2O60573 245 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 HNRNPCL1O60812 293 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 DBIP07108 87 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 LINGO3P0C6S8 592 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 GKN3PP0CG01 181 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 HNRNPCL4P0DMR1 293 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 PRKCAP17252 672 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 AGAP20933 346 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 SHC1P29353 583 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 CHRNB4P30926 498 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 CEACAM8P31997 349 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 PTGER4P35408 488 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 PGM1P36871 562 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 IDH2P48735 452 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 MRPL19P49406 292 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZNF136P52737 540 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 CARD18P57730 90 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 EEFSECP57772 596 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 RPS3AP61247 264 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 FOXF1Q12946 379 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 KLF10Q13118 480 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 CBFBQ13951 182 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 NFYCQ13952 458 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 SELPLGQ14242 412 aa5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 CAPRIN1Q14444 709 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 GANABQ14697 944 aaKnown RBP5.19□□□□□ -1.58
HMGB3P24-201ENST00000433260 PON3Q15166 354 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms