RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 GFM1Q96RP9 751 aaKnown RBP15.33■□□□□ 0.04
USHBP1-203ENST00000431146 KRCC1Q9NPI7 259 aaPredicted RBP15.33■□□□□ 0.04
USHBP1-203ENST00000431146 CLEC2DQ9UHP7 191 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 CDH10Q9Y6N8 788 aa15.33■□□□□ 0.04
USHBP1-203ENST00000431146 SAGP10523 405 aaPredicted RBP15.32■□□□□ 0.04
USHBP1-203ENST00000431146 HPGDP15428 266 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 PSMD4P55036 377 aaKnown RBP15.32■□□□□ 0.04
USHBP1-203ENST00000431146 PRKCDQ05655 676 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 EBPQ15125 230 aaKnown RBP15.32■□□□□ 0.04
USHBP1-203ENST00000431146 MED22Q15528 200 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 SLC23A3Q6PIS1 610 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 FANK1Q8TC84 345 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 OR52D1Q9H346 318 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 FBXO4Q9UKT5 387 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 MED31Q9Y3C7 131 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 KIF26BQ2KJY2 2108 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 TRAV27A0A087WT01 109 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 FRG2CA6NGY1 282 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 C17orf51A8MQB3 221 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 GMFGO60234 142 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 GABARAPO95166 117 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 UTS2O95399 124 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 IL33O95760 270 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 LCN10Q6JVE6 187 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 NCCRP1Q6ZVX7 275 aaPredicted RBP15.32■□□□□ 0.04
USHBP1-203ENST00000431146 ZNF550Q7Z398 422 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 MRGPREQ86SM8 312 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 RNF113BQ8IZP6 322 aaKnown RBP15.32■□□□□ 0.04
USHBP1-203ENST00000431146 OR14A16Q8NHC5 309 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 PHOSPHO1Q8TCT1 267 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 FCGR1BQ92637 280 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 SLC38A2Q96QD8 506 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 TRIM2Q9C040 744 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 HHATLQ9HCP6 504 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 RPS6KB2Q9UBS0 482 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 COPS7AQ9UBW8 275 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 RPL36Q9Y3U8 105 aaKnown RBP15.32■□□□□ 0.04
USHBP1-203ENST00000431146 TTC28Q96AY4 2481 aa15.32■□□□□ 0.04
USHBP1-203ENST00000431146 SURF4O15260 269 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 ICOSLGO75144 302 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 REM1O75628 298 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 PIPP12273 146 aaPredicted RBP15.31■□□□□ 0.04
USHBP1-203ENST00000431146 HOXD12P35452 270 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 CCR4P51679 360 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 PGGHGQ32M88 737 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 HLA-DQA1Q5Y7H0 255 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 SMARCD3Q6STE5 483 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 PAQR6Q6TCH4 344 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 CBLN3Q6UW01 205 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 LSMEM1Q8N8F7 131 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 OR1N1Q8NGS0 311 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 OR51A7Q8NH64 312 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 NDNFQ8TB73 568 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 KLHDC3Q9BQ90 382 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 CDCA4Q9BXL8 241 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 RTN4RQ9BZR6 473 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 AKIRIN1Q9H9L7 192 aaPredicted RBP15.31■□□□□ 0.04
USHBP1-203ENST00000431146 UBQLN4Q9NRR5 601 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 CFL2Q9Y281 166 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 CARD8Q9Y2G2 431 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 IDSB3KWA1 339 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 CNOT3O75175 753 aaKnown RBP15.31■□□□□ 0.04
USHBP1-203ENST00000431146 NCS1P62166 190 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 ARMCX4Q5H9R4 360 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 FAM69BQ5VUD6 431 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 THSD4Q6ZMP0 1018 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 SHFQ7M4L6 423 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 PPP1R3BQ86XI6 285 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 SLITRK4Q8IW52 837 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 SLC34A3Q8N130 599 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 TMCO5AQ8N6Q1 288 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 PLPP5Q8NEB5 264 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 ANKK1Q8NFD2 765 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 OR2T33Q8NG76 320 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 TMEM80Q96HE8 168 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 HS6ST2Q96MM7 605 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 WWTR1Q9GZV5 400 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 UBQLN3Q9H347 655 aa15.31■□□□□ 0.04
USHBP1-203ENST00000431146 FAM183AA6NL82 134 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 EFCAB7A8K855 629 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 D6RAR5 112 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 SCDO00767 359 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 BCL10O95999 233 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 HEXBP07686 556 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 SP9P0CG40 484 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 TBXA2RP21731 343 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 CRYZQ08257 329 aaKnown RBP15.3■□□□□ 0.04
USHBP1-203ENST00000431146 SLC35F1Q5T1Q4 408 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 C16orf47Q6ZP98 133 aaPredicted RBP15.3■□□□□ 0.04
USHBP1-203ENST00000431146 BMP8AQ7Z5Y6 402 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 CMIPQ8IY22 773 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 CDK20Q8IZL9 346 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 BBS1Q8NFJ9 593 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 OTULINQ96BN8 352 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 PLEKHA8Q96JA3 519 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 TGIF2Q9GZN2 237 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 ARRDC1-AS1Q9H2J1 176 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 PCNX3Q9H6A9 2034 aa15.3■□□□□ 0.04
USHBP1-203ENST00000431146 LRRN3E7EW58 273 aa15.29■□□□□ 0.04
USHBP1-203ENST00000431146 SYPP08247 313 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms