RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MAOAP21397 527 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 GTF2E2P29084 291 aaKnown RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 CD97P48960 835 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 ATP12AP54707 1039 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 PSMD4P55036 377 aaKnown RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 PSPHP78330 225 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 FOXK2Q01167 660 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 FABP5Q01469 135 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 BDH1Q02338 343 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF267Q14586 743 aaPredicted RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 C14orf28Q4W4Y0 310 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 PLBD1Q6P4A8 553 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF322Q6U7Q0 402 aaPredicted RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 BMP8AQ7Z5Y6 402 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 KLHL36Q8N4N3 616 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 OR51Q1Q8NH59 317 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 PTP4A1Q93096 173 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 SLC30A2Q9BRI3 323 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 FOXQ1Q9C009 403 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 SPRTNQ9H040 489 aaPredicted RBP12.86□□□□□ -0.35
HOXC4-202ENST00000430889 OR10A5Q9H207 317 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 MCCC2Q9HCC0 563 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 SNTG1Q9NSN8 517 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 ERVK-19Q9WJR5 959 aa12.86□□□□□ -0.35
HOXC4-202ENST00000430889 SPAG17Q6Q759 2223 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 EFCAB7A8K855 629 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 SLC30A4O14863 429 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 HCN1O60741 890 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 CDRT1O95170 752 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 TGM4P49221 684 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 COPZ1P61923 177 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 HNRNPKP61978 463 aaKnown RBP eCLIP12.85□□□□□ -0.35
HOXC4-202ENST00000430889 SERTAD2Q14140 314 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 DEFB133Q30KQ1 61 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 SPANXN2Q5MJ10 180 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 FNDC7Q5VTL7 733 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
HOXC4-202ENST00000430889 KIRREL2Q6UWL6 708 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF550Q7Z398 422 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 CADM3Q8N126 398 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 BCORP1Q8N888 145 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 FAM71CQ8NEG0 241 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 GRHL3Q8TE85 626 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 TMEM203Q969S6 136 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 MMABQ96EY8 250 aaPredicted RBP12.85□□□□□ -0.35
HOXC4-202ENST00000430889 DCLRE1CQ96SD1 692 aaKnown RBP12.85□□□□□ -0.35
HOXC4-202ENST00000430889 SECISBP2Q96T21 854 aaKnown RBP12.85□□□□□ -0.35
HOXC4-202ENST00000430889 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 COQ7Q99807 217 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 PELOQ9BRX2 385 aaKnown RBP12.85□□□□□ -0.35
HOXC4-202ENST00000430889 G6PC3Q9BUM1 346 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 CCDC32Q9BV29 185 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 MED20Q9H944 212 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 CPNE5Q9HCH3 593 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 Q9N2J8 555 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 PDE7BQ9NP56 450 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 ASB6Q9NWX5 421 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 SEMA5BQ9P283 1151 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 TNFRSF10DQ9UBN6 386 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 ICAM5Q9UMF0 924 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 BAIAP2Q9UQB8 552 aa12.85□□□□□ -0.35
HOXC4-202ENST00000430889 MRPS17Q9Y2R5 130 aaKnown RBP12.85□□□□□ -0.35
HOXC4-202ENST00000430889 CAB39Q9Y376 341 aaPredicted RBP12.85□□□□□ -0.35
HOXC4-202ENST00000430889 PIAS2O75928 621 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 PTTG1O95997 202 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 BMP7P18075 431 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 GALP22466 123 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 CD1CP29017 333 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 SLC9A3P48764 834 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 BIKQ13323 160 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 UBXN2BQ14CS0 331 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF791Q3KP31 576 aaPredicted RBP12.84□□□□□ -0.35
HOXC4-202ENST00000430889 CDK20Q8IZL9 346 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 TMEM99Q8N816 258 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 SYT14Q8NB59 555 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
HOXC4-202ENST00000430889 OIT3Q8WWZ8 545 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 KATNB1Q9BVA0 655 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 MIXL1Q9H2W2 232 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 CAPN10Q9HC96 672 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 LRIT1Q9P2V4 623 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 SERTAD3Q9UJW9 196 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 SLC35A3Q9Y2D2 325 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 RNF215Q9Y6U7 377 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 FER1L5A0AVI2 2057 aa12.84□□□□□ -0.35
HOXC4-202ENST00000430889 TRAV27A0A087WT01 109 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 IGKV3D-11A0A0A0MRZ8 115 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 ZC3H12DA2A288 527 aaKnown RBP12.83□□□□□ -0.35
HOXC4-202ENST00000430889 SERINC4A6NH21 518 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 AKAP8O43823 692 aaKnown RBP12.83□□□□□ -0.35
HOXC4-202ENST00000430889 SDC2P34741 201 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 RFX3P48380 749 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 CFHR1Q03591 330 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 GPR50Q13585 617 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms