RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 RADILQ96JH8 1075 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 MYEF2Q9P2K5 600 aaKnown RBP12.02□□□□□ -0.49
PTCH1-207ENST00000429896 TNFRSF10DQ9UBN6 386 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 CD40LGP29965 261 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 FXYD6P3P58550 94 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 PITPNAQ00169 270 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 PON3Q15166 354 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 USP43Q70EL4 1123 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 MED25Q71SY5 747 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 UEVLDQ8IX04 471 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 LINC01555Q8NAE3 123 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 LIN28AQ9H9Z2 209 aaKnown RBP12.02□□□□□ -0.49
PTCH1-207ENST00000429896 CD320Q9NPF0 282 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 FBXO9Q9UK97 447 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-207ENST00000429896 PCDHGA8Q9Y5G5 932 aa12.02□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF891A8MT65 544 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-207ENST00000429896 DDAH2O95865 285 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 GPR137CQ8N3F9 429 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 INO80EQ8NBZ0 244 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-207ENST00000429896 TSLPQ969D9 159 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 C16orf58Q96GQ5 468 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 OXSR1O95747 527 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-207ENST00000429896 MAD2L1BPQ15013 274 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-207ENST00000429896 FCRL6Q6DN72 434 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 PRSS42Q7Z5A4 293 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 PPP1R14BQ96C90 147 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 LAMP5Q9UJQ1 280 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 TRAV6A0A075B6T7 132 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 TLX2O43763 284 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-207ENST00000429896 FGF17O60258 216 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 PLP2Q04941 152 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 GTF2H4Q92759 462 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 WACQ9BTA9 647 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 PCDHGB1Q9Y5G3 927 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 KANTRA0A1W2PQU2 76 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 OR6C70A6NIJ9 312 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 AGAP14A8MT82 685 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 MKRN2OSH3BPM6 223 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 NME4O00746 187 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 PCDH17O14917 1159 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 ITGA10O75578 1167 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 UTS2O95399 124 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 ITIH1P19827 911 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 BTG2P78543 158 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 CEACAM7Q14002 265 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 XKR7Q5GH72 579 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF227Q86WZ6 799 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 KLHDC8BQ8IXV7 354 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 TMEM41AQ96HV5 264 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 ANKRD10Q9NXR5 420 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 TAS2R10Q9NYW0 307 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 SLC7A7Q9UM01 511 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 TEX13DA0A0J9YY54 714 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-207ENST00000429896 BSGP35613 385 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 ALG10Q5BKT4 473 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 FCRLBQ6BAA4 426 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 OR5M10Q6IEU7 315 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 IGFN1Q86VF2 1251 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 TCEANCQ8N8B7 351 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 ITPAQ9BY32 194 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 TUBB1Q9H4B7 451 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 HIF3AQ9Y2N7 669 aa12.01□□□□□ -0.49
PTCH1-207ENST00000429896 SULT2B1O00204 365 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 GKN3PP0CG01 181 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 RAB12Q6IQ22 244 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 OR51A7Q8NH64 312 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 ELP4Q96EB1 424 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 SLC45A3Q96JT2 553 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 NOP16Q9Y3C1 178 aaKnown RBP12□□□□□ -0.49
PTCH1-207ENST00000429896 TMPRSS11DO60235 418 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 CDRT1O95170 752 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 CNOT4O95628 575 aaKnown RBP12□□□□□ -0.49
PTCH1-207ENST00000429896 SLC26A5P58743 744 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 ATP6AP1Q15904 470 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 HYAL4Q2M3T9 481 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 ANKRD53Q8N9V6 530 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 OR5T1Q8NG75 326 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 CXorf36Q9H7Y0 433 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 MLXQ9UH92 298 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF670-ZNF695F2Z2N8 137 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 G3V3Y1 287 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 TACSTD2P09758 323 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 UBE2IP63279 158 aaKnown RBP12□□□□□ -0.49
PTCH1-207ENST00000429896 SELENOWP63302 87 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 SYPL1Q16563 259 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 UBE2UQ5VVX9 321 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 ERMAPQ96PL5 475 aaPredicted RBP12□□□□□ -0.49
PTCH1-207ENST00000429896 SPNS1Q9H2V7 528 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 SH2B3Q9UQQ2 575 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 M0R3H8 397 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 SLC9A3P48764 834 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 IHHQ14623 411 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 WBP2NLQ6ICG8 309 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 ZSCAN4Q8NAM6 433 aaPredicted RBP12□□□□□ -0.49
PTCH1-207ENST00000429896 HMGCLL1Q8TB92 370 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 MRPL15Q9P015 296 aaKnown RBP12□□□□□ -0.49
PTCH1-207ENST00000429896 MEMO1Q9Y316 297 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 TPTEP56180 551 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 RUNX2Q13950 521 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms