RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 ENTPD8Q5MY95 495 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 CNIH2Q6PI25 160 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 MSI2Q96DH6 328 aaKnown RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 RSPRY1Q96DX4 576 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 IL17CQ9P0M4 197 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 TFP02787 698 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 DCTP40126 519 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 RPS18P62269 152 aaKnown RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 DCAF12Q5T6F0 453 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF417Q8TAU3 575 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 SPIN2AQ99865 258 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 SPIN2BQ9BPZ2 258 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 MMP28Q9H239 520 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF334Q9HCZ1 680 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 GNG13Q9P2W3 67 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 C7P10643 843 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 HTR3AP46098 478 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 CSNK1EP49674 416 aaKnown RBP14.43□□□□□ -0.1
PTPRF-206ENST00000429895 SIRPAP78324 504 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 DPY19L2P1Q6NXN4 242 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 ACBD4Q8NC06 268 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 C17orf50Q8WW18 174 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 OLAHQ9NV23 265 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 GHRLQ9UBU3 117 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 F8W036 122 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 TMX2-CTNND1H3BSU7 103 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 SIGLEC6O43699 453 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 BCAS1O75363 584 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-206ENST00000429895 RETP07949 1114 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 PTAFRP25105 342 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 BLOC1S1P78537 153 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 NFATC4Q14934 902 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 RANBP10Q6VN20 620 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 MKXQ8IYA7 352 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 PIANPQ8IYJ0 282 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 HSD17B8Q92506 261 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 OR6C1Q96RD1 312 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 PRMT8Q9NR22 394 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-206ENST00000429895 GPR160Q9UJ42 338 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 TIMM8AO60220 97 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-206ENST00000429895 UGDHO60701 494 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 F13BP05160 661 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 MGAT3Q09327 533 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 LINC00696Q6ZRV3 163 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF679Q8IYX0 411 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 CHCHD4Q8N4Q1 142 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 DTWD1Q8N5C7 304 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 SLC6A16Q9GZN6 736 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 LYRM1O43325 122 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 DNAJB5O75953 348 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 IGHG1P01857 330 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 HSD17B1P14061 328 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 HTR5AP47898 357 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 ARL6IP1Q15041 203 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 SFRP5Q5T4F7 317 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 KIAA0907Q7Z7F0 614 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-206ENST00000429895 ANKRD13BQ86YJ7 626 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 CCDC32Q9BV29 185 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 SAP130Q9H0E3 1048 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 SAV1Q9H4B6 383 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-206ENST00000429895 GSTO2Q9H4Y5 243 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 ACPPP15309 386 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 RAB6AP20340 208 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 TECPR1Q7Z6L1 1165 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 ACPTQ9BZG2 426 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 KLHL42Q9P2K6 505 aa14.43□□□□□ -0.1
PTPRF-206ENST00000429895 EIF3FO00303 357 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 DOK2O60496 412 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 AKAIN1P0CW23 69 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 HLA-DMAP28067 261 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 IL2RGP31785 369 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 AHRP35869 848 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 TSFMP43897 325 aaKnown RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 OR1Q1Q15612 314 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 ADAMTS19Q8TE59 1207 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 HHIPL1Q96JK4 782 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 TMEM184BQ9Y519 407 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 LTN1O94822 1766 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 FAM183AA6NL82 134 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 A8MXE2 369 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 ARPC1BO15143 372 aaKnown RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 GK2Q14410 553 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 C15orf39Q6ZRI6 1047 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 MMP21Q8N119 569 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 FNDC9Q8TBE3 224 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 SNAPC3Q92966 411 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CHFRQ96EP1 664 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 VN1R3Q9BXE9 311 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 RABL2AQ9UBK7 228 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 RABL2BQ9UNT1 228 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF337Q9Y3M9 751 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 IGKV6-21A0A0C4DH24 114 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 HSBP1L1C9JCN9 74 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 ARHGEF15O94989 841 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 MYF6P23409 242 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 CCR7P32248 378 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 RPL23AP62750 156 aaKnown RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 GAB1Q13480 694 aa14.42□□□□□ -0.1
PTPRF-206ENST00000429895 TMEM176BQ3YBM2 270 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-206ENST00000429895 ACSM3Q53FZ2 586 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms