RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 APODP05090 189 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 LIMS3P0CW19 117 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 LIMS4P0CW20 117 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 UQCRC1P31930 480 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 PXNP49023 591 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 B2MP61769 119 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 REEP5Q00765 189 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 CRYZQ08257 329 aaKnown RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 TSPAN31Q12999 210 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 C1orf61Q13536 156 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 GPR50Q13585 617 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 DUSP6Q16828 381 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 C12orf73Q69YU5 71 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ZNF770Q6IQ21 691 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 ARMC6Q6NXE6 501 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OOSP2Q86WS3 158 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 NRROSQ86YC3 692 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 LRRC25Q8N386 305 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 ARL14Q8N4G2 192 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 TTLQ8NG68 377 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR2L5Q8NG80 312 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR2A1Q8NGT9 310 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 SETD6Q8TBK2 473 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ZNF431Q8TF32 576 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 ACOT11Q8WXI4 607 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 ST6GAL2Q96JF0 529 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 C4orf36Q96KX1 117 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ERMAPQ96PL5 475 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 SLC25A18Q9H1K4 315 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 SLC25A19Q9HC21 320 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ACSS1Q9NUB1 689 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 CLEC1BQ9P126 229 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ACSL5Q9ULC5 683 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 COLEC10Q9Y6Z7 277 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 CEP295Q9C0D2 2601 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR6C74A6NCV1 312 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 UNC119BA6NIH7 251 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 NPIPB8E9PQR5 432 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 KHDRBS3O75525 346 aaKnown RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 CLEC3AO75596 197 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 HLA-DQA2P01906 255 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ELK1P19419 428 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 GABRA5P31644 462 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 CLDN12P56749 244 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ELOAQ14241 798 aaKnown RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 ANGPT1Q15389 498 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OTPQ5XKR4 325 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ABHD17CQ6PCB6 329 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ZNF574Q6ZN55 896 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 GDF7Q7Z4P5 450 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 FGD2Q7Z6J4 655 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 CRIPAKQ8N1N5 446 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 NATD1Q8N6N6 113 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 TP53I13Q8NBR0 393 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR52E2Q8NGJ4 325 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR4Q3Q8NH05 313 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 TRMT10AQ8TBZ6 339 aaKnown RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 SP7Q8TDD2 431 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 PATE1Q8WXA2 126 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 MS4A6EQ96DS6 147 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ELP4Q96EB1 424 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 PINK1Q9BXM7 581 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 LMAN2LQ9H0V9 348 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 CLEC4MQ9H2X3 399 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 PLEKHB1Q9UF11 243 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 FBXL4Q9UKA2 621 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 MED31Q9Y3C7 131 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 CHST2Q9Y4C5 530 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 PLXND1Q9Y4D7 1925 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ANKRD61A6NGH8 418 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 A8MUA0 341 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 C2CD4DB7Z1M9 353 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 LRRN3E7EW58 273 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 BLOC1S5-TXNDC5H3BN57 136 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 MAN2B1O00754 1011 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 STX11O75558 287 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 PDGFBP01127 241 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 PIPP12273 146 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 SNRPBP14678 240 aaKnown RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 CPEP16870 476 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ZNF81P51508 661 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ATP12AP54707 1039 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR12D2P58182 307 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 GNG2P59768 71 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 SRSF5Q13243 272 aaKnown RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 FGFBP1Q14512 234 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OCLNQ16625 522 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 C3orf38Q5JPI3 329 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 TANGO2Q6ICL3 276 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 RAB12Q6IQ22 244 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ANKRD54Q6NXT1 300 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 PRSS45Q7RTY3 260 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 UBE3DQ7Z6J8 389 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 CDH24Q86UP0 819 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 SLC44A3Q8N4M1 653 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 FBXO15Q8NCQ5 510 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR2L3Q8NG85 312 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR7G2Q8NG99 324 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 OR5T3Q8NGG3 340 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 SLC35A4Q96G79 324 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms