RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SULT1A4P0DMN0 295 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 CD8BP10966 210 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 GABRA1P14867 456 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 CRISP1P54107 249 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 PTGES3Q15185 160 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF630Q2M218 657 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF628Q5EBL2 1059 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ADNP2Q6IQ32 1131 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 SBSNQ6UWP8 590 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 INO80EQ8NBZ0 244 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ACBD4Q8NC06 268 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ISG20Q96AZ6 181 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 OPN3Q9H1Y3 402 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 TMEM218A2RU14 115 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 AKR7A3O95154 331 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ARHGAP40Q5TG30 622 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR5M10Q6IEU7 315 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 UBAC2Q8NBM4 344 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 PAQR8Q8TEZ7 354 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 POLDIP3Q9BY77 421 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 METTL9Q9H1A3 318 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 P2RY12Q9H244 342 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 PLEKHB1Q9UF11 243 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 TTC3P53804 2025 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 SELENOFO60613 162 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 SOX14O95416 240 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 PRNPP04156 253 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ABCD3P28288 659 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 CRYBB2P43320 205 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 RPS25P62851 125 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 SLC7A9P82251 487 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 PLK5Q496M5 336 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 NUDT13Q86X67 352 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF683Q8IZ20 524 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ARMC10Q8N2F6 343 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 CLDN19Q8N6F1 224 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 RSRP1Q9BUV0 290 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 BCO1Q9HAY6 547 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 SC5DO75845 299 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 F11P03951 625 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 MYOGP15173 224 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 HMGA1P17096 107 aaKnown RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 HOXA9P31269 272 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 SELENOPP49908 381 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 NDUFA6P56556 154 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 WNT4P56705 351 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 COL13A1Q5TAT6 717 aaPredicted RBP13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ATCAYQ86WG3 371 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR2AP1Q8NGE2 309 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR10H2O60403 315 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 C18orf21Q32NC0 220 aaPredicted RBP13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 NCMAPQ5T1S8 102 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 CHFRQ96EP1 664 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 SLC12A9Q9BXP2 914 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 C20orf85Q9H1P6 137 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 ZCCHC4Q9H5U6 513 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 A0A1W2PRB8 838 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 AP4M1O00189 453 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 C21orf58P58505 322 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 SCARB2Q14108 478 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 KIAA0141Q14154 515 aaPredicted RBP13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 TMIGD1Q6UXZ0 262 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 GAL3ST4Q96RP7 486 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 SLC46A2Q9BY10 475 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 SLC27A6Q9Y2P4 619 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 E7EQ34 232 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 GOSR2O14653 212 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR2T1O43869 369 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 OPN1SWP03999 348 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 SNRNP70P08621 437 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 RBMS1P29558 406 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 GDI1P31150 447 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 NAE1Q13564 534 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 DYRK1AQ13627 763 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 PPA1Q15181 289 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 GUCA2BQ16661 112 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 OLFML2AQ68BL7 652 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR52W1Q6IF63 320 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 HEPHL1Q6MZM0 1159 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 OR1S1Q8NH92 325 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 SETD7Q8WTS6 366 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 SMARCD2Q92925 531 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 TRMT61BQ9BVS5 477 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 ATG10Q9H0Y0 220 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 RGCCQ9H4X1 137 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 NINQ8N4C6 2090 aa13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 PRRC2BQ5JSZ5 2229 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-203ENST00000428982 C2orf92A0A1B0GVN3 265 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 FMO6PO60774 539 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 CLDN7O95471 211 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 TXNDC12O95881 172 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 ELK1P19419 428 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 DDTP30046 118 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 MAT1AQ00266 395 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 LMAN2Q12907 356 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 TCTN1Q2MV58 587 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 MLIPQ5VWP3 458 aa13.48□□□□□ -0.25
SYNGAP1-203ENST00000428982 LIPNQ5VXI9 398 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms