RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 APOA1P02647 267 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 NGFRP08138 427 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 ALOX5P09917 674 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 PTHLHP12272 177 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 PIPP12273 146 aaPredicted RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 BCKDHBP21953 392 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 RPL4P36578 427 aaKnown RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 SNRPGP62308 76 aaKnown RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 ZP2Q05996 745 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 DUSP8Q13202 625 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 TBRG1Q3YBR2 411 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 ATAD3CQ5T2N8 411 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 SLX4IPQ5VYV7 408 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 FAM131AQ6UXB0 335 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 ASB18Q6ZVZ8 466 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 MCATQ8IVS2 390 aaKnown RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 SIX5Q8N196 739 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 FAM131CQ96AQ9 280 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 DIRAS2Q96HU8 199 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 NELL2Q99435 816 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 HOXD1Q9GZZ0 328 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 PPIL3Q9H2H8 161 aaKnown RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 OR52D1Q9H346 318 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 SMOC1Q9H4F8 434 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 MRPL15Q9P015 296 aaKnown RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 MTCH2Q9Y6C9 303 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 A3GALT2U3KPV4 340 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 A0A1W2PRQ8 180 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 CPNE3O75131 537 aaKnown RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 SLITRK5O94991 958 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 PSMA1P25786 263 aaKnown RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 APEX1P27695 318 aaKnown RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 ITPKBP27987 946 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 FABP5Q01469 135 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 P2RY14Q15391 338 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 TP53I3Q53FA7 332 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 DDI2Q5TDH0 399 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 C1QL3Q5VWW1 255 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 ATCAYQ86WG3 371 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 PHC2Q8IXK0 858 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 MINDY2Q8NBR6 621 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 KBTBD8Q8NFY9 601 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 OR56A1Q8NGH5 318 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 OR8J1Q8NGP2 316 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 PIGXQ8TBF5 258 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 RIT1Q92963 219 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 GAL3ST3Q96A11 431 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 SCARF2Q96GP6 870 aaPredicted RBP7.74□□□□□ -1.17
CD44-208ENST00000428726 PRRC1Q96M27 445 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 ADOQ96SZ5 270 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 TMEM246Q9BRR3 403 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 FBRSQ9HAH7 460 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 GTF2A1LQ9UNN4 478 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 KLK4Q9Y5K2 254 aa7.74□□□□□ -1.17
CD44-208ENST00000428726 A0A0G2JPF8 293 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 A0A1W2PQ09 198 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 A0A1W2PQL4 384 aaPredicted RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 C2orf74A8MZ97 194 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 HNRNPCL2B2RXH8 293 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 HNRNPCL3B7ZW38 293 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SHISA8B8ZZ34 492 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 C11orf98E9PRG8 122 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CDC40O60508 579 aaKnown RBP eCLIP7.73□□□□□ -1.17
CD44-208ENST00000428726 TMCC2O75069 709 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PDGFBP01127 241 aaPredicted RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 ZGLP1P0C6A0 271 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 HNRNPCL4P0DMR1 293 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CLDN6P56747 220 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 RPS15AP62244 130 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 E2F1Q01094 437 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PLAURQ03405 335 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 COX10Q12887 443 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CCINQ13939 588 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CRMP1Q14194 572 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 TIMM50Q3ZCQ8 353 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PRAMEF8Q5VWM4 474 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PRAMEF7Q5VXH5 474 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 MEDAGQ5VYS4 303 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 C12orf73Q69YU5 71 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SSX6Q7RTT6 188 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 VWA5B2Q8N398 1253 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 OR52E2Q8NGJ4 325 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 DIO2Q92813 273 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SLC25A36Q96CQ1 311 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 SDHCQ99643 169 aaPredicted RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 FUZQ9BT04 418 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 RTN4RQ9BZR6 473 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 FKRPQ9H9S5 495 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CACYBPQ9HB71 228 aaKnown RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 SLC25A19Q9HC21 320 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 MEPEQ9NQ76 525 aaPredicted RBP7.73□□□□□ -1.17
CD44-208ENST00000428726 SLC22A7Q9Y694 548 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 HPGDSO60760 199 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 UBXN7O94888 489 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 APBB3O95704 486 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 NDUFS1P28331 727 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 PYCR1P32322 319 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 CLDN12P56749 244 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 OR12D2P58182 307 aa7.73□□□□□ -1.17
CD44-208ENST00000428726 FXYD6P3P58550 94 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms