RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CDC14CA4D256 554 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 MAN2B1O00754 1011 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 VEGFDO43915 354 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 EIF4EP06730 217 aaKnown RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 PCSK2P16519 638 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 MAT1AQ00266 395 aaKnown RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 C11orf88Q6PI97 169 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 OR2L3Q8NG85 312 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 OR5W2Q8NH69 310 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 NKD1Q969G9 470 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 RERGQ96A58 199 aaPredicted RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 TBC1D20Q96BZ9 403 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 GABRG3Q99928 467 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 A4GALTQ9NPC4 353 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 ING1Q9UK53 422 aaPredicted RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 MRPS2Q9Y399 296 aaKnown RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 MDC1Q14676 2089 aaKnown RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 CIB4A0PJX0 185 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 EPPINO95925 133 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 EDNRAP25101 427 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 PPP1CAP62136 330 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 SNRPGP62308 76 aaKnown RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 FUT5Q11128 374 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.42□□□□□ -0.42
USP42-203ENST00000426246 PGGHGQ32M88 737 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 SLC25A25Q6KCM7 469 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 IKBIPQ70UQ0 350 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 SLC44A3Q8N4M1 653 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 OR4K14Q8NGD5 310 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 OR8S1Q8NH09 359 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 GOT1L1Q8NHS2 421 aaPredicted RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 RFT1Q96AA3 541 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 RAB7BQ96AH8 199 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 MSANTD3Q96H12 275 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 TAPBPLQ9BX59 468 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 CACNG6Q9BXT2 260 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 BTBD1Q9H0C5 482 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 SLC6A20Q9NP91 592 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 OR6C2Q9NZP2 312 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 ATXN7L1Q9ULK2 861 aaPredicted RBP12.42□□□□□ -0.42
USP42-203ENST00000426246 PCDHGB2Q9Y5G2 931 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 TVP23AA6NH52 213 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 SLC9B1P1A6NJY1 282 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 IL1AP01583 271 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 GSTM3P21266 225 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 HMGA2P52926 109 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 EFR3AQ14156 821 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 MINDY4Q4G0A6 757 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 OR5M3Q8NGP4 307 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 OSTF1Q92882 214 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 SLC17A9Q9BYT1 436 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 ADAM30Q9UKF2 790 aa12.42□□□□□ -0.42
USP42-203ENST00000426246 A0A1W2PQF6 199 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 A0A1W2PRQ8 180 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 C4orf47A7E2U8 309 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 TSPAN4O14817 238 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 FMO6PO60774 539 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 DHFRP00374 187 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 UCHL1P09936 223 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 AHCYP23526 432 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 PXNP49023 591 aaPredicted RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 MAB21L1Q13394 359 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 TMEM196Q5HYL7 178 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 RNF165Q6ZSG1 346 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 PRR22Q8IZ63 422 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 DNAAF1Q8NEP3 725 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 GHSRQ92847 366 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 EFHD2Q96C19 240 aaPredicted RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 GAL3ST4Q96RP7 486 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 NDC1Q9BTX1 674 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 PLGP00747 810 aaPredicted RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 PRKCAP17252 672 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 MAKP20794 623 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 ITPKBP27987 946 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 CTHP32929 405 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 PPP3R1P63098 170 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 DGCR2P98153 550 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 RAB40BQ12829 278 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 FAPQ12884 760 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 FGL2Q14314 439 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 GNA13Q14344 377 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 ACSM3Q53FZ2 586 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 DMRTC1Q5HYR2 192 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 C12orf73Q69YU5 71 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 CAMKMTQ7Z624 323 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 RANBP3LQ86VV4 465 aaPredicted RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 LRRC25Q8N386 305 aaPredicted RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 FAM26EQ8N5C1 309 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 OR2L5Q8NG80 312 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 OR56A1Q8NGH5 318 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 CNOT9Q92600 299 aaKnown RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 SENP5Q96HI0 755 aaPredicted RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 FCRL1Q96LA6 429 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 OR14A2Q96R54 314 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 TMEM138Q9NPI0 162 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 MAU2Q9Y6X3 613 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 UNC119BA6NIH7 251 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms