RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 LIPNQ5VXI9 398 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 TMEM108Q6UXF1 575 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 SZRD1Q7Z422 152 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 OR6Y1Q8NGX8 325 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 GPR119Q8TDV5 335 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 DCAKDQ8WVC6 231 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 RADILQ96JH8 1075 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 FOXN4Q96NZ1 517 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 SORCS2Q96PQ0 1159 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 PAFAH2Q99487 392 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 INPP5KQ9BT40 448 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 TNFRSF12AQ9NP84 129 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 NTMQ9P121 344 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 NFU1Q9UMS0 254 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 TRAF6Q9Y4K3 522 aa11.89□□□□□ -0.51
VEGFB-202ENST00000426086 PLCE1Q9P212 2302 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 ARFGEF3Q5TH69 2177 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 ESPNB1AK53 854 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 NPIPB8E9PQR5 432 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 PDPK1O15530 556 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 TGFAP01135 160 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 INHBAP08476 426 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 APEHP13798 732 aaKnown RBP11.88□□□□□ -0.51
VEGFB-202ENST00000426086 HPGDP15428 266 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 IMPDH1P20839 514 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 PTAFRP25105 342 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 GPC1P35052 558 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 P2RX1P51575 399 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 SLC25A3Q00325 362 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 KIAA0040Q15053 153 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 VPS26BQ4G0F5 336 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 ARL13AQ5H913 290 aaPredicted RBP11.88□□□□□ -0.51
VEGFB-202ENST00000426086 NOXRED1Q6NXP6 359 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 LRIG3Q6UXM1 1119 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 P2RY8Q86VZ1 359 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 MISPQ8IVT2 679 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 WDR31Q8NA23 367 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 CDS1Q92903 461 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 MRGPRX4Q96LA9 322 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 FUT8Q9BYC5 575 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 QRSL1Q9H0R6 528 aaKnown RBP11.88□□□□□ -0.51
VEGFB-202ENST00000426086 GSTO2Q9H4Y5 243 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 MGAT4BQ9UQ53 548 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 CCL27Q9Y4X3 112 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 PTGDR2Q9Y5Y4 395 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 GPC6Q9Y625 555 aaPredicted RBP11.88□□□□□ -0.51
VEGFB-202ENST00000426086 KCNE3Q9Y6H6 103 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 DYSFO75923 2080 aa11.88□□□□□ -0.51
VEGFB-202ENST00000426086 ANK2Q01484 3957 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 GJE1A6NN92 205 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 ZNF724A8MTY0 619 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 POC1B-GALNT4F8VUJ3 575 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 URI1O94763 535 aaPredicted RBP11.87□□□□□ -0.51
VEGFB-202ENST00000426086 ENO1P06733 434 aaKnown RBP11.87□□□□□ -0.51
VEGFB-202ENST00000426086 CSF3P09919 207 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 EGR1P18146 543 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 FRKP42685 505 aaPredicted RBP11.87□□□□□ -0.51
VEGFB-202ENST00000426086 PDLIM4P50479 330 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 LCP2Q13094 533 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 SQLEQ14534 574 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 GABRA6Q16445 453 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 WHAMMP3Q1A5X7 153 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 KLHL26Q53HC5 615 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 FBXW9Q5XUX1 488 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 ZNF544Q6NX49 715 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 ZNF100Q8IYN0 542 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 COX18Q8N8Q8 333 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 ANKS4BQ8N8V4 417 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 CEP70Q8NHQ1 597 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 RFWD2Q8NHY2 731 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 DNAJA3Q96EY1 480 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 MS4A4EQ96PG1 132 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 OR5B2Q96R09 309 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 ADAM19Q9H013 955 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 RAB17Q9H0T7 212 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 CDC42EP4Q9H3Q1 356 aaKnown RBP11.87□□□□□ -0.51
VEGFB-202ENST00000426086 MID1IP1Q9NPA3 183 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 SIRT3Q9NTG7 399 aaPredicted RBP11.87□□□□□ -0.51
VEGFB-202ENST00000426086 ACTL7BQ9Y614 415 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 ATP23Q9Y6H3 246 aa11.87□□□□□ -0.51
VEGFB-202ENST00000426086 CIB4A0PJX0 185 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 LRP5LA4QPB2 252 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 ZNF716A6NP11 495 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 ATP6V1G2-DDX39BF2Z307 99 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 AKAP10O43572 662 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 TCF21O43680 179 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 ITGA5P08648 1049 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 ALOX5P09917 674 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 SLC7A1P30825 629 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 IL2RGP31785 369 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 PHBP35232 272 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 PRKAA2P54646 552 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 PKNOX1P55347 436 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 POU6F2P78424 691 aaPredicted RBP11.86□□□□□ -0.51
VEGFB-202ENST00000426086 CKAP4Q07065 602 aaKnown RBP11.86□□□□□ -0.51
VEGFB-202ENST00000426086 SELENBP1Q13228 472 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 QPRTQ15274 297 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 SWI5Q1ZZU3 235 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 SLC25A53Q5H9E4 307 aa11.86□□□□□ -0.51
VEGFB-202ENST00000426086 C9orf135Q5VTT2 229 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms