RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 TUBAL3A6NHL2 446 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 EFNA2O43921 213 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 ANP32DO95626 131 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 C1QCP02747 245 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 CD8BP10966 210 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 PGCP20142 388 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 PGM1P36871 562 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 KIR2DL2P43627 348 aaPredicted RBP16.57■□□□□ 0.24
MSH5-207ENST00000425703 CPA2P48052 419 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 RNF144AP50876 292 aaPredicted RBP16.57■□□□□ 0.24
MSH5-207ENST00000425703 ATP4BP51164 291 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 MVDP53602 400 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 CHRNEQ04844 493 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 QPRTQ15274 297 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 TOMM34Q15785 309 aaPredicted RBP16.57■□□□□ 0.24
MSH5-207ENST00000425703 HBMQ6B0K9 141 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 OLIG3Q7RTU3 272 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 TMEM234Q8WY98 164 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 VPS33AQ96AX1 596 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 THUMPD3Q9BV44 507 aaKnown RBP16.57■□□□□ 0.24
MSH5-207ENST00000425703 SLC38A1Q9H2H9 487 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 MTHFD2LQ9H903 347 aaPredicted RBP16.57■□□□□ 0.24
MSH5-207ENST00000425703 TPT1P8Q9HAU6 139 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 TIGARQ9NQ88 270 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 GLRX2Q9NS18 164 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.57■□□□□ 0.24
MSH5-207ENST00000425703 SLC6A13Q9NSD5 602 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 CRIM1Q9NZV1 1036 aa16.57■□□□□ 0.24
MSH5-207ENST00000425703 POLQO75417 2590 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 AGAP5A6NIR3 686 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 TNFSF11O14788 317 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 AQP8O94778 261 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 SYNGR4O95473 234 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 PABPC4LP0CB38 370 aaKnown RBP16.56■□□□□ 0.24
MSH5-207ENST00000425703 UBTFL6P0CB48 400 aaPredicted RBP16.56■□□□□ 0.24
MSH5-207ENST00000425703 IL11P20809 199 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 CCR4P51679 360 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 CARD18P57730 90 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 KCNJ10P78508 379 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 SELENBP1Q13228 472 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 DAZAP2Q15038 168 aaPredicted RBP16.56■□□□□ 0.24
MSH5-207ENST00000425703 SYPL1Q16563 259 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 COX20Q5RI15 118 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 C6orf10Q5SRN2 563 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 BLOC1S3Q6QNY0 202 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 FAM214BQ7L5A3 538 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 LUZP2Q86TE4 346 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 ANKFN1Q8N957 763 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 CNEP1R1Q8N9A8 125 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 RFWD2Q8NHY2 731 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 GTF2H4Q92759 462 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 ZG16BQ96DA0 208 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 GMPPAQ96IJ6 420 aaPredicted RBP16.56■□□□□ 0.24
MSH5-207ENST00000425703 SIKE1Q9BRV8 207 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 PRRG4Q9BZD6 226 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 TMEM185BQ9H7F4 350 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 GALNT8Q9NY28 637 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 CALML5Q9NZT1 146 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 PRDM4Q9UKN5 801 aa16.56■□□□□ 0.24
MSH5-207ENST00000425703 PDZD2O15018 2839 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 MED12LQ86YW9 2145 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 FAM221AA4D161 298 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 ENO4A6NNW6 628 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 CXCL13O43927 109 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 GOSR1O95249 250 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 CGAP01215 116 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 CHRM4P08173 479 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 NR2F1P10589 423 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 NID1P14543 1247 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 KRTAP10-9P60411 292 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 GNA13Q14344 377 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 GTF2IRD2BQ6EKJ0 949 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 VWA1Q6PCB0 445 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 DNAJC14Q6Y2X3 702 aaPredicted RBP16.55■□□□□ 0.24
MSH5-207ENST00000425703 BTLAQ7Z6A9 289 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 GTF2IRD2Q86UP8 949 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 FUNDC1Q8IVP5 155 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 ZZZ3Q8IYH5 903 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 PNPT1Q8TCS8 783 aaKnown RBP16.55■□□□□ 0.24
MSH5-207ENST00000425703 OSTF1Q92882 214 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 CPNE4Q96A23 557 aaPredicted RBP16.55■□□□□ 0.24
MSH5-207ENST00000425703 ZNF524Q96C55 264 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 RAD21L1Q9H4I0 556 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 RABEP2Q9H5N1 569 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 ACER3Q9NUN7 267 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 P2RX2Q9UBL9 471 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 EMC9Q9Y3B6 208 aa16.55■□□□□ 0.24
MSH5-207ENST00000425703 CSMD2Q7Z408 3487 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 A0A096LPI6 279 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 SS18L1O75177 396 aaPredicted RBP16.54■□□□□ 0.24
MSH5-207ENST00000425703 CTAG2O75638 210 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 CYP7B1O75881 506 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 SMNDC1O75940 238 aaKnown RBP eCLIP16.54■□□□□ 0.244e-8■■□□□ 12.1
MSH5-207ENST00000425703 OPN1LWP04000 364 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 EPXP11678 715 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 RPS4Y1P22090 263 aaKnown RBP16.54■□□□□ 0.24
MSH5-207ENST00000425703 SFTPDP35247 375 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 CRATP43155 626 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 SLC6A8P48029 635 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 SESN3P58005 492 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms