RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 C3orf33Q6P1S2 294 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZYG11AQ6WRX3 759 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 IFT20Q8IY31 132 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MUC15Q8N387 334 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR5W2Q8NH69 310 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FBXO30Q8TB52 745 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 POC1BQ8TC44 478 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 HOXB13Q92826 284 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NEUROG1Q92886 237 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 EGLN2Q96KS0 407 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TSSK3Q96PN8 268 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CACNG6Q9BXT2 260 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GSTO2Q9H4Y5 243 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 EML4Q9HC35 981 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PARPBPQ9NWS1 579 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PSMC3IPQ9P2W1 217 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GDF2Q9UK05 429 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 KCNS2Q9ULS6 477 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PCDHGB4Q9UN71 923 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NOSIPQ9Y314 301 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DTNAQ9Y4J8 743 aa10.87□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR5H1A6NKK0 313 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SULT2B1O00204 365 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 AZIN1O14977 448 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ANKRD28O15084 1053 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 LMX1BO60663 402 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CYTIPO60759 359 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MRPL33O75394 65 aaKnown RBP10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CYP7B1O75881 506 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 HMGN2P05204 90 aaKnown RBP10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CPA3P15088 417 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 USF1P22415 310 aaPredicted RBP10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PAX7P23759 505 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DNAJB13P59910 316 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 VLDLRP98155 873 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF117Q03924 483 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SQLEQ14534 574 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 LASP1Q14847 261 aaKnown RBP10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PRSS53Q2L4Q9 553 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 KLHL26Q53HC5 615 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 C6orf52Q5T4I8 152 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CCNJQ5T5M9 372 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FBXW9Q5XUX1 488 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CDC73Q6P1J9 531 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF540Q8NDQ6 660 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR10H5Q8NGA6 315 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF563Q8TA94 476 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 GPR119Q8TDV5 335 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SLC25A43Q8WUT9 341 aaPredicted RBP10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 OR5P2Q8WZ92 322 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CIDECQ96AQ7 238 aaPredicted RBP10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 APH1AQ96BI3 265 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 KCNS3Q9BQ31 491 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TRMOQ9BU70 441 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SRXN1Q9BYN0 137 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ASB6Q9NWX5 421 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 UPB1Q9UBR1 384 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FKBP7Q9Y680 259 aa10.86□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ELOA3DA6NLF2 546 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ZNF814B7Z6K7 855 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 RAMP1O60894 148 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PGM3O95394 542 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 NTN1O95631 604 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 AGR2O95994 175 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 AK1P00568 194 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 UBL4AP11441 157 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PRKCAP17252 672 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 SRD5A1P18405 259 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 APOBEC3AP31941 199 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MAGEA8P43361 318 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 EFNA4P52798 201 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FOXA1P55317 472 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 LSM11P83369 360 aaKnown RBP eCLIP10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CHRNEQ04844 493 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 KIAA0040Q15053 153 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PDK3Q15120 406 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ELOA3BQ3SY89 546 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DCST2Q5T1A1 773 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FAM166AQ6J272 317 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ANKRD26P1Q6NSI1 321 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 KLHL24Q6TFL4 600 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TMPPEQ6ZT21 453 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FRMD7Q6ZUT3 714 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 MTDHQ86UE4 582 aaKnown RBP10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 DDIASQ8IXT1 998 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ELOA3Q8NG57 546 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PIGXQ8TBF5 258 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ST8SIA1Q92185 356 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CDS1Q92903 461 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 C16orf58Q96GQ5 468 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PPP3R2Q96LZ3 170 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PSD2Q9BQI7 771 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 EXD2Q9NVH0 621 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 TBK1Q9UHD2 729 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 PRSS50Q9UI38 385 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FBXO9Q9UK97 447 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ICAM5Q9UMF0 924 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 FIS1Q9Y3D6 152 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 ATP23Q9Y6H3 246 aa10.85□□□□□ -0.67
HLA-DQB3-203ENST00000425319 CSPG4Q6UVK1 2322 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms