RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ZNF563Q8TA94 476 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 ARSGQ96EG1 525 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 SLC41A3Q96GZ6 507 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 DHRS1Q96LJ7 313 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 FRMD6Q96NE9 622 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 CIB1Q99828 191 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 WFDC6Q9BQY6 131 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 RNF32Q9H0A6 362 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 C12orf10Q9HB07 376 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 SH2D2AQ9NP31 389 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 KRCC1Q9NPI7 259 aaPredicted RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 FLRT3Q9NZU0 649 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 PDP1Q9P0J1 537 aaPredicted RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 LRFN1Q9P244 771 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 OAZ3Q9UMX2 235 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 LYVE1Q9Y5Y7 322 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 CHCHD2Q9Y6H1 151 aaPredicted RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 URB1O60287 2271 aaKnown RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 CNTRLQ7Z7A1 2325 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 EML6Q6ZMW3 1958 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 EXPH5Q8NEV8 1989 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 IGLV3-32A0A0A0MS00 114 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 ARRDC5A6NEK1 342 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 ANKUB1A6NFN9 424 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 SAC3D1A6NKF1 404 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 CPSF4LA6NMK7 179 aaKnown RBP9.43□□□□□ -0.9
MDC1-205ENST00000425072 SCO2O43819 266 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 CBR3O75828 277 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 RASAL1O95294 804 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 HPRP00739 348 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 PRG2P13727 222 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 CD46P15529 392 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 CDH2P19022 906 aaPredicted RBP9.43□□□□□ -0.9
MDC1-205ENST00000425072 ELAVL4P26378 380 aaKnown RBP9.43□□□□□ -0.9
MDC1-205ENST00000425072 RBM34P42696 430 aaKnown RBP9.43□□□□□ -0.9
MDC1-205ENST00000425072 HSPA13P48723 471 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 ALDH3A2P51648 485 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 RAD23AP54725 363 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 GAS1P54826 345 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 COX10Q12887 443 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 SKP2Q13309 424 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 MFAP5Q13361 173 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 GANABQ14697 944 aaKnown RBP9.43□□□□□ -0.9
MDC1-205ENST00000425072 CD226Q15762 336 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 NPTX1Q15818 432 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 RFX4Q33E94 735 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 OTUD3Q5T2D3 398 aaPredicted RBP9.43□□□□□ -0.9
MDC1-205ENST00000425072 TTC33Q6PID6 262 aaPredicted RBP9.43□□□□□ -0.9
MDC1-205ENST00000425072 LINC00696Q6ZRV3 163 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 GDF7Q7Z4P5 450 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 COMTD1Q86VU5 262 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 PLCZ1Q86YW0 608 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 CADM2Q8N3J6 435 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 GALNT4Q8N4A0 578 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 CBR4Q8N4T8 237 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 GATSQ8NAP1 163 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 RNF217Q8TC41 542 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 GPR119Q8TDV5 335 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 NRG4Q8WWG1 115 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 ACOT11Q8WXI4 607 aaPredicted RBP9.43□□□□□ -0.9
MDC1-205ENST00000425072 DNAJC9Q8WXX5 260 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 RDH12Q96NR8 316 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 PRR14Q9BWN1 585 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 OSBPL11Q9BXB4 747 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 ADAM19Q9H013 955 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 GPR83Q9NYM4 423 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 RHCGQ9UBD6 479 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 ENOPH1Q9UHY7 261 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 ICAM5Q9UMF0 924 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 MGAT4BQ9UQ53 548 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 WIF1Q9Y5W5 379 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 KCNMB2Q9Y691 235 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 PCNX3Q9H6A9 2034 aa9.43□□□□□ -0.9
MDC1-205ENST00000425072 A0A087WZY1 265 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SH3PXD2BA1X283 911 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 KLRC4-KLRK1H3BQV0 150 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 CHP2O43745 196 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 OR10H3O60404 316 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 MAN1A2O60476 641 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SEMA7AO75326 666 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 WDPCPO95876 746 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 ZNF26P17031 533 aaPredicted RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 WT1P19544 449 aaPredicted RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 CXCR1P25024 350 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 APOBEC1P41238 236 aaKnown RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 EIF1P41567 113 aaKnown RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 LIMS1P48059 325 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 MASP1P48740 699 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 CCR4P51679 360 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 HOXC5Q00444 222 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 ZNF117Q03924 483 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SRSF6Q13247 344 aaKnown RBP9.42□□□□□ -0.9
MDC1-205ENST00000425072 TUBA3CQ13748 450 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 DAG1Q14118 895 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 EXOC3L2Q2M3D2 409 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 COL28A1Q2UY09 1125 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 FGD3Q5JSP0 725 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 ATP1A1-AS1Q5TC04 95 aa9.42□□□□□ -0.9
MDC1-205ENST00000425072 SLC25A25Q6KCM7 469 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms