RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 ADORA2BP29275 332 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 DAOAP59103 153 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 MRPS11P82912 194 aaKnown RBP6.4□□□□□ -1.39
CNOT4-205ENST00000423368 FAM72AQ5TYM5 149 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 FAM72DQ6L9T8 149 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 UBE2R2Q712K3 238 aaPredicted RBP6.4□□□□□ -1.39
CNOT4-205ENST00000423368 LIMS2Q7Z4I7 341 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 CTU1Q7Z7A3 348 aaKnown RBP6.4□□□□□ -1.39
CNOT4-205ENST00000423368 FAM72BQ86X60 149 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF664Q8N3J9 261 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 POGLUT1Q8NBL1 392 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 GPRC5AQ8NFJ5 357 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 OR56B4Q8NH76 319 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 MCOLN1Q9GZU1 580 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 TRPV2Q9Y5S1 764 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 PIK3C2AO00443 1686 aa6.4□□□□□ -1.39
CNOT4-205ENST00000423368 M0QZ24 198 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 RFXANKO14593 260 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SUV39H1O43463 412 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SOD3P08294 240 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 USP17L7P0C7H9 530 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 C5AR1P21730 350 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 CERS1P27544 350 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 RPL4P36578 427 aaKnown RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SERPINF1P36955 418 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 DHPSP49366 369 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 TNFSF10P50591 281 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SLC36A2Q495M3 483 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 KIAA1161Q6NSJ0 714 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 TRIM40Q6P9F5 258 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF783Q6ZMS7 281 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 TECPR1Q7Z6L1 1165 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SLITRK4Q8IW52 837 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 OR11G2Q8NGC1 345 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 C9orf43Q8TAL5 461 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SECTM1Q8WVN6 248 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 OIT3Q8WWZ8 545 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 RRNAD1Q96FB5 475 aaKnown RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF354BQ96LW1 612 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 CHST5Q9GZS9 411 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 MED9Q9NWA0 146 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 RASL12Q9NYN1 266 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 STOX2Q9P2F5 926 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ASCC3Q8N3C0 2202 aaKnown RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 CPED1A4D0V7 1026 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 FAM183AA6NL82 134 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 MASP2O00187 686 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 TLR4O00206 839 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 PPP1R2P9O14990 202 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 OR10H3O60404 316 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 PIAS2O75928 621 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ENDOD1O94919 500 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 IGHV2-5P01817 119 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 HIST1H2ABP04908 130 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SRPRAP08240 638 aaKnown RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 C1GALT1C1LP0DN25 315 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 CPN1P15169 458 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SELEP16581 610 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 IDSP22304 550 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 KDELR2P33947 212 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 GDNFP39905 211 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 CAP2P40123 477 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 TTPAP49638 278 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 MMP16P51512 607 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ART1P52961 327 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 AP1S1P61966 158 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 RBX1P62877 108 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ID2Q02363 134 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 FOXO1Q12778 655 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 IKZF1Q13422 519 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF239Q16600 458 aaKnown RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 DOK7Q18PE1 504 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SLC25A35Q3KQZ1 300 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 SV2CQ496J9 727 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 CDNFQ49AH0 187 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 C14orf28Q4W4Y0 310 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 INTS6LQ5JSJ4 861 aaKnown RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 CLEC12AQ5QGZ9 265 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 METAP1DQ6UB28 335 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 PGAP1Q75T13 922 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 HIST3H2AQ7L7L0 130 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ACOT1Q86TX2 421 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ACBD4Q8NC06 268 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 FAM98AQ8NCA5 519 aaKnown RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 OR4A15Q8NGL6 344 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 OR1N1Q8NGS0 311 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 OR4C6Q8NH72 309 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 OR6X1Q8NH79 312 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF671Q8TAW3 534 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 HIST1H2ACQ93077 130 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 TMEM176AQ96HP8 235 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF670Q9BS34 389 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 CDCA4Q9BXL8 241 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 TCEAL2Q9H3H9 227 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-205ENST00000423368 DNAJC4Q9NNZ3 241 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 GDE1Q9NZC3 331 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 PADI1Q9ULC6 663 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 ERVW-1Q9UQF0 538 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 MAP4K5Q9Y4K4 846 aa6.39□□□□□ -1.39
CNOT4-205ENST00000423368 TIAM2Q8IVF5 1701 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms